Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

ADNP 1 dataset

ChIP K562 ENCFF492SKF 410 bp overlap

AFF4 1 dataset

ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 197 bp overlap

BCOR 2 datasets

ChIP K-562 ENCSR808AKZ.BCOR.K-562 187 bp overlap

ChIP K562 ENCFF343XWA 56 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 267 bp overlap

ChIP K562 ENCFF673OEZ 353 bp overlap

CBX1 2 datasets

ChIP K-562 ENCSR948QLZ.CBX1.K-562 128 bp overlap

ChIP K562 ENCFF008KGK 264 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 157 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 280 bp overlap

ERG 1 dataset

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 176 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 295 bp overlap

ChIP DE DE-FOXA2-1 672 bp overlap

ChIP DE DE-FOXA2-2 655 bp overlap

GATA1 3 datasets

ChIP K-562 GSE107726.GATA1.K-562 243 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 246 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 242 bp overlap

GATA2 3 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 249 bp overlap

ChIP K-562 ENCSR000DKA.GATA2.K-562 326 bp overlap

ChIP K562 ENCFF830LLA 403 bp overlap

GATA4 5 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 241 bp overlap

ChIP DE DE-GATA4-1 637 bp overlap

ChIP DE DE-GATA4-2 639 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 416 bp overlap

ChIP foregut GSE117136.GATA4.foregut 299 bp overlap

GATA6 11 datasets

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap

ChIP DE DE-GATA6-1 672 bp overlap

ChIP DE DE-GATA6-2 646 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 442 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 422 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 306 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 612 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 473 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 482 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 455 bp overlap

ChIP foregut GSE117136.GATA6.foregut 337 bp overlap

GTF2I 1 dataset

ChIP K562 ENCFF539BYI 74 bp overlap

HDAC2 2 datasets

ChIP K-562 ENCSR075HTM.HDAC2.K-562 115 bp overlap

ChIP K-562 ENCSR893WSB.HDAC2.K-562 159 bp overlap

HNRNPUL1 1 dataset

ChIP K-562 ENCSR296MXW.HNRNPUL1.K-562 167 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 516 bp overlap

KDM1A 15 datasets

ChIP H1 ENCFF696SGD 268 bp overlap

ChIP K-562 ENCSR908CMW.KDM1A.K-562 167 bp overlap

ChIP K-562 ENCSR360HRA.KDM1A.K-562 158 bp overlap

ChIP K-562 GSE117944.KDM1A.K-562 166 bp overlap

ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 100 bp overlap

ChIP K562 ENCFF128TYE 237 bp overlap

ChIP K562 ENCFF133OLU 224 bp overlap

ChIP K562 ENCFF934ZRG 231 bp overlap

ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 164 bp overlap

ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 163 bp overlap

ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 193 bp overlap

ChIP SET-2_GSK GSE121424.KDM1A.SET-2_GSK 191 bp overlap

ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 149 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 147 bp overlap

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 127 bp overlap

MED26 2 datasets

ChIP HEK293T GSE121024.MED26.HEK293T 89 bp overlap

ChIP HEK293T GSE121024.MED26.HEK293T 104 bp overlap

NFE2 1 dataset

ChIP ProEs GSE59087.NFE2.ProEs 96 bp overlap

PTBP1 2 datasets

ChIP K-562 GSE120104.PTBP1.K-562 141 bp overlap

ChIP K-562 ENCSR948KMB.PTBP1.K-562 102 bp overlap

RBM25 3 datasets

ChIP K-562 ENCSR791OZM.RBM25.K-562 193 bp overlap

ChIP K562 ENCFF248CGR 152 bp overlap

ChIP K562 ENCFF957ORK 152 bp overlap

RBM39 1 dataset

ChIP K-562 ENCSR764OXF.RBM39.K-562 112 bp overlap

RCOR1 1 dataset

ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 149 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 282 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 672 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 376 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 310 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 545 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 520 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 257 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 204 bp overlap

SMARCA5 2 datasets

ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 132 bp overlap

ChIP K562 ENCFF936KHY 237 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 476 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 672 bp overlap

SUZ12 1 dataset

ChIP WA01 ENCSR000ATS.SUZ12.WA01 136 bp overlap

TEAD4 1 dataset

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 95 bp overlap

TP53 1 dataset

ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 67 bp overlap

ZFX 1 dataset

ChIP HEK293T ENCFF402JZW 318 bp overlap

ZMYM3 4 datasets

ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 151 bp overlap

ChIP K-562 ENCSR102KIN.ZMYM3.K-562 205 bp overlap

ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 188 bp overlap

ChIP K562 ENCFF361LXT 77 bp overlap

ZNF280D 1 dataset

ChIP HEK293 ENCSR451CYX.ZNF280D.HEK293 119 bp overlap

ZNF580 2 datasets

ChIP HEK293 ENCFF906MQV 232 bp overlap

ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 149 bp overlap

ZNF623 2 datasets

ChIP HEK293 ENCFF505YHP 267 bp overlap

ChIP HEK293 ENCSR022IZK.ZNF623.HEK293 309 bp overlap

Gene	Dist. to TSS	Distance	Link type
LEFTY1	6.9 kb	Proximal	Proximity
PYCR2	20.3 kb	Distal	Multiome
TMEM63A	21.6 kb	Distal	Multiome
LEFTY2	37.4 kb	Distal	Multiome
ENSG00000242861	57.5 kb	Distal	Multiome
EPHX1	93.9 kb	Distal	Multiome
SDE2	95.3 kb	Distal	Multiome
SRP9	126.2 kb	Distal	Multiome
H3-3A-DT	157.9 kb	Distal	Multiome
H3-3A	158.7 kb	Distal	Multiome
ENAH	250.9 kb	Distal	Multiome
ACBD3	282.7 kb	Distal	Multiome

Genome Browser