chr13 : 79,171,074 – 79,171,908
834 bp 89 TFs 1 linked gene
This 834 bp open chromatin element is linked to RBM26 and is bound by 89 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RBM26 234.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:79,166,074 – 79,176,908
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 288 bp overlap
AR 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 250 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 262 bp overlap
ASCL1 2 datasets
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 167 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 183 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 622 bp overlap
Ascl2 3 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap
Motif DE_48h DE_48h-Ascl2_MA0816.1 10 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 297 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 653 bp overlap
BRD4 7 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 298 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 299 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 263 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 147 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 627 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 834 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 834 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF262VBH 251 bp overlap
DMRTA2 3 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
EHF 2 datasets
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_36h DE_36h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif DE_48h DE_48h-ELK1HOXA1_MA1931.1 14 bp overlap
ELK4 2 datasets
Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 279 bp overlap
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
ERF::FOXO1 2 datasets
Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_48h DE_48h-ERFFOXO1_MA1936.2 12 bp overlap
ETV1 2 datasets
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
EZH2 5 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 715 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 834 bp overlap
ChIP HeLa-S3 ENCFF318LHU 625 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP neural progenitor cell ENCFF018MKA 654 bp overlap
EZH2_phosphoT487 3 datasets
ChIP HCT-116 ENCSR429CLV.EZH2_phosphoT487.HCT-116 645 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 560 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 259 bp overlap
Elf5 2 datasets
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Erg 2 datasets
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 215 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 632 bp overlap
ChIP DE DE-FOXA2-2 800 bp overlap
FOXC1 1 dataset
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
FOXH1 4 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
FOXN3 1 dataset
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_36h DE_36h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_36h DE_36h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_48h DE_48h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXP2 1 dataset
Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap
Foxq1 1 dataset
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
GABPA 2 datasets
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 786 bp overlap
ChIP DE DE-GATA4-2 834 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 805 bp overlap
ChIP DE DE-GATA6-2 834 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 816 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 834 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 756 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 780 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 834 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 812 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 358 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 241 bp overlap
GFI1 1 dataset
ChIP THP-1 GSE90769.GFI1.THP-1 275 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_36h DE_36h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_48h DE_48h-HOXB2ELK1_MA1957.1 14 bp overlap
HSF2 2 datasets
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
Motif DE_48h DE_48h-HSF2_MA0770.1 13 bp overlap
IKZF2 2 datasets
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
Ikzf3 2 datasets
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 452 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 437 bp overlap
KDM1A 1 dataset
ChIP SKNO-1_DMSO GSE71739.KDM1A.SKNO-1_DMSO 210 bp overlap
MYB 3 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 133 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 248 bp overlap
NFATC3 2 datasets
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 2 datasets
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 270 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 278 bp overlap
PLAG1 2 datasets
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
Motif DE_48h DE_48h-PLAG1_MA0163.1 14 bp overlap
PRDM1 2 datasets
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
PRDM9 4 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 395 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 269 bp overlap
RCOR1 1 dataset
ChIP AML GSE112074.RCOR1.AML 267 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 129 bp overlap
SCRT1 2 datasets
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
SCRT2 2 datasets
Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap
Motif DE_48h DE_48h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 803 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 834 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 803 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 361 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 693 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 713 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 725 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 311 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 273 bp overlap
SMARCA4 3 datasets
ChIP NGP GSE134626.SMARCA4.NGP 149 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 549 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 604 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 123 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 410 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 232 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 314 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 387 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 210 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 155 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 225 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 639 bp overlap
SP5_Hydra 1 dataset
ChIP HEK293_dDBD GSE110277.SP5_Hydra.HEK293_dDBD 177 bp overlap
SPI1 6 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 158 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 160 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 129 bp overlap
ChIP HL-60 ENCFF645GBT 102 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 146 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 123 bp overlap
Spi1 4 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 236 bp overlap
ZBTB11 2 datasets
Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_48h DE_48h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 2 datasets
Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_48h DE_48h-ZBTB7A_MA0750.3 9 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 148 bp overlap
ZNF175 2 datasets
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap
ZNF184 4 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 138 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
ZNF317 3 datasets
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
ZNF425 1 dataset
ChIP HEK293T GSE78099.ZNF425.HEK293T 248 bp overlap
ZNF528 2 datasets
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF547 2 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap
ZNF549 3 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
ZNF701 5 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZNF730 1 dataset
ChIP HEK293T GSE78099.ZNF730.HEK293T 329 bp overlap
ZNF75D 2 datasets
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_48h DE_48h-ZNF75D_MA1601.2 12 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
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