chr13 : 74,819,269 – 74,819,793

524 bp 74 TFs 0 linked genes

This 524 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

Arid5a 1 dataset

Motif DE_60h DE_60h-Arid5a_MA0602.2 8 bp overlap

Atf3 2 datasets

Motif DE_48h DE_48h-Atf3_MA1988.2 7 bp overlap

Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap

BACH1 2 datasets

Motif DE_48h DE_48h-BACH1_MA1633.2 9 bp overlap

Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap

BATF 2 datasets

Motif DE_48h DE_48h-BATF_MA1634.2 7 bp overlap

Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap

BATF3 2 datasets

Motif DE_48h DE_48h-BATF3_MA0835.3 7 bp overlap

Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 2 datasets

Motif DE_48h DE_48h-BATFJUN_MA0462.3 7 bp overlap

Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap

BHLHE22 2 datasets

Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

BNC2 2 datasets

Motif DE_48h DE_48h-BNC2_MA1928.2 7 bp overlap

Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 251 bp overlap

DMRTA1 1 dataset

Motif DE_60h DE_60h-DMRTA1_MA1707.2 10 bp overlap

DMRTA2 1 dataset

Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap

DUX4 4 datasets

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 185 bp overlap

EOMES 2 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 195 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 524 bp overlap

ChIP DE DE-FOXA2-2 524 bp overlap

ChIP KerCT GSE90454.FOXA2.KerCT 236 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 524 bp overlap

ChIP DE DE-GATA4-2 524 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 524 bp overlap

ChIP DE DE-GATA6-2 524 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 479 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 197 bp overlap

GRHL1 1 dataset

Motif DE_60h DE_60h-GRHL1_MA0647.2 10 bp overlap

GRHL2 1 dataset

Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

Gli1 2 datasets

Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap

Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap

Gli2 2 datasets

Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap

Motif DE_60h DE_60h-Gli2_MA0734.4 9 bp overlap

JUN::JUNB 2 datasets

Motif DE_48h DE_48h-JUNJUNB_MA1132.2 8 bp overlap

Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap

Jun 2 datasets

Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

KLF6 2 datasets

Motif DE_48h DE_48h-KLF6_MA1517.2 9 bp overlap

Motif DE_60h DE_60h-KLF6_MA1517.2 9 bp overlap

KLF9 2 datasets

Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap

Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap

LHX6 2 datasets

Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap

Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MITF 1 dataset

ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 222 bp overlap

MSC 1 dataset

Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap

MXI1 1 dataset

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NFYA 1 dataset

Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap

NFYC 1 dataset

Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap

NKX2-2 1 dataset

Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_60h DE_60h-NKX2-5_MA0063.3 7 bp overlap

Neurod2 2 datasets

Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

ONECUT1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 156 bp overlap

ONECUT2 1 dataset

Motif DE_60h DE_60h-ONECUT2_MA0756.3 8 bp overlap

Olig2 2 datasets

Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

PHOX2A 2 datasets

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

POU3F1 2 datasets

Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap

Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap

Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap

POU3F4 2 datasets

Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

POU5F1 1 dataset

Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap

PPARG 1 dataset

Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap

RBPJ 2 datasets

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

SCRT2 1 dataset

Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 274 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 251 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 154 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 131 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 337 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 440 bp overlap

TBR1 1 dataset

Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap

TEAD1 1 dataset

Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap

TFAP4 2 datasets

Motif DE_48h DE_48h-TFAP4_MA0691.1 10 bp overlap

Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap

THRB 2 datasets

Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap

Motif DE_60h DE_60h-THRB_MA1574.2 13 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Tcf12 2 datasets

Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

ZNF24 1 dataset

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

ZNF282 2 datasets

Motif DE_48h DE_48h-ZNF282_MA1154.2 15 bp overlap

Motif DE_60h DE_60h-ZNF282_MA1154.2 15 bp overlap

ZNF317 1 dataset

Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap

ZNF582 1 dataset

Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap

ZNF675 1 dataset

Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap

ZSCAN4 4 datasets

Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap

Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap

Zfp809 2 datasets

Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap