chr13 : 50,141,121 50,141,308
187 bp 55 TFs 0 linked genes
This 187 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:50,136,121 – 50,146,308
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AR 15 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 157 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 117 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 161 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 187 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 187 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 96 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 128 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 137 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 117 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 87 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 145 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 153 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 187 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 148 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 80 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 174 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 161 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 187 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 187 bp overlap
BRD4 3 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 151 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 187 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 187 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 187 bp overlap
ChIP H1 ENCFF126NLU 187 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 187 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 72 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 51 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 187 bp overlap
EZH2 1 dataset
ChIP WA01 ENCSR000ASY.EZH2.WA01 125 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 69 bp overlap
FOXA1 13 datasets
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 111 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 121 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 140 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 180 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 141 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 83 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 86 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 129 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 116 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 133 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 187 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 159 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 118 bp overlap
FOXA2 3 datasets
ChIP PANC-1 GSE119930.FOXA2.PANC-1 65 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 174 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 182 bp overlap
FOXF1 2 datasets
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 89 bp overlap
ChIP GIST48 GSE106624.FOXF1.GIST48 119 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 187 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 187 bp overlap
HOXB13 7 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 59 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 77 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 178 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 175 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 187 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 68 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 172 bp overlap
HSF1 3 datasets
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 163 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 187 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 187 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 108 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 187 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 187 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 100 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 161 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 97 bp overlap
ChIP H1 ENCFF747ZPQ 187 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 187 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 187 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 155 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 187 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 187 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 187 bp overlap
ChIP hESC GSE18292.NANOG.hESC 106 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 120 bp overlap
NR3C1 2 datasets
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 104 bp overlap
ChIP THP-1_Dex GSE99887.NR3C1.THP-1_Dex 167 bp overlap
PGR 3 datasets
ChIP T-47D GSE31129.PGR.T-47D 181 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 187 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 171 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 71 bp overlap
POU5F1 4 datasets
ChIP GM23338 ENCFF333SNB 187 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 187 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 134 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 187 bp overlap
RAD21 3 datasets
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 153 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 187 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 159 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 187 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 106 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 187 bp overlap
SIN3A 1 dataset
ChIP PFSK-1 ENCFF218MAY 187 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 187 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 182 bp overlap
SMARCC1 2 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 125 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 187 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 187 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 187 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 187 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 187 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 151 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 131 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 152 bp overlap
STAT3 3 datasets
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 160 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 173 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 184 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 120 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 187 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 187 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 187 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 187 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap