Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

BRD4 5 datasets

ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 512 bp overlap

ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 83 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 206 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 410 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 91 bp overlap

CASZ1 3 datasets

ChIP rhabdomyosarcoma_Ctrl GSE126142.CASZ1.rhabdomyosarcoma_Ctrl 240 bp overlap

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 592 bp overlap

ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 638 bp overlap

CHD4 2 datasets

ChIP RH5 GSE155861.CHD4.RH5 289 bp overlap

ChIP SCMC GSE155861.CHD4.SCMC 575 bp overlap

CTCF 3 datasets

ChIP RH4 GSE83726.CTCF.RH4 193 bp overlap

ChIP SUM159 GSE46055.CTCF.SUM159 108 bp overlap

ChIP uterus ENCFF837OEY 251 bp overlap

DPRX 1 dataset

Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap

ELF1 2 datasets

ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 208 bp overlap

ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 214 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 404 bp overlap

EZH2 2 datasets

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 232 bp overlap

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 229 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 450 bp overlap

ChIP DE DE-FOXA2-2 675 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 326 bp overlap

ChIP DE DE-GATA4-2 384 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-2 542 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 567 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 621 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 483 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 420 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 654 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 567 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 311 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 147 bp overlap

IRF7 1 dataset

Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

JUN 2 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 327 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 483 bp overlap

MED1 2 datasets

ChIP RH4 GSE83726.MED1.RH4 81 bp overlap

ChIP RH4 GSE83726.MED1.RH4 231 bp overlap

MED12 1 dataset

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 93 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 138 bp overlap

MXI1 1 dataset

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

MYCN 1 dataset

ChIP RH4 GSE83726.MYCN.RH4 402 bp overlap

MYF5 1 dataset

ChIP Rh18 GSE84628.MYF5.Rh18 178 bp overlap

MYOD1 7 datasets

ChIP RD GSE137168.MYOD1.RD 180 bp overlap

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 130 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 201 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 254 bp overlap

ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 301 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 158 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 154 bp overlap

MYOG 2 datasets

ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 395 bp overlap

ChIP RH4 GSE83726.MYOG.RH4 271 bp overlap

Nkx3-2 1 dataset

Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 145 bp overlap

RAD21 1 dataset

ChIP RH4 GSE83726.RAD21.RH4 244 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 160 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 300 bp overlap

RELA 1 dataset

ChIP KB_IL GSE52469.RELA.KB_IL 76 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 386 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 698 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 698 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 663 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 689 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 690 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 698 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 466 bp overlap

SNAI2 1 dataset

ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 135 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 261 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 374 bp overlap

Sox1 1 dataset

Motif DE_36h DE_36h-Sox1_MA0870.1 15 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 238 bp overlap

TP53 1 dataset

Motif DE_36h DE_36h-TP53_MA0106.3 18 bp overlap

Thap11 1 dataset

Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 180 bp overlap

ZFP42 1 dataset

Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap

ZNF184 1 dataset

Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap

ZNF189 1 dataset

Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap

ZNF213 1 dataset

Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap

ZNF24 1 dataset

Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap

ZNF282 1 dataset

Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap

ZNF549 1 dataset

Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
LINC00598		40.7 kb	Distal	Multiome
FOXO1		433.8 kb	Distal	Multiome+HiCAR

Genome Browser