chr13 : 39,047,658 – 39,047,890
232 bp 49 TFs 2 linked genes
This 232 bp open chromatin element is linked to NHLRC3 and PROSER1 and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NHLRC3 9.3 kb Proximal Proximity
PROSER1 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:39,042,658 – 39,052,890
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ChIP VCaP GSE148358.AR.VCaP 152 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 232 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 232 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 205 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 152 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 229 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 220 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 166 bp overlap
CTCF 332 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 232 bp overlap
ChIP A673 ENCFF123WOM 131 bp overlap
ChIP AG04449 ENCFF248MBD 174 bp overlap
ChIP AG04450 ENCFF116DJL 232 bp overlap
ChIP AG09309 ENCFF478XPS 232 bp overlap
ChIP BE2C ENCFF757SRF 232 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 229 bp overlap
ChIP BJ ENCFF434HEC 232 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 190 bp overlap
ChIP C4-2B ENCFF821XVN 232 bp overlap
ChIP C4-2B ENCFF821XVN 232 bp overlap
ChIP Caco-2 ENCFF753NZV 232 bp overlap
ChIP Caco-2 ENCFF934QYS 190 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 143 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 147 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 232 bp overlap
ChIP DOHH2 ENCFF637WNW 232 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 232 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 164 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 181 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 232 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 224 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 214 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 152 bp overlap
ChIP GM12864 ENCFF357DQE 232 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 184 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 134 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 167 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 178 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 156 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 100 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 151 bp overlap
ChIP GM12875 ENCFF081UCQ 221 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 113 bp overlap
ChIP GM12878 ENCFF485TGR 221 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 124 bp overlap
ChIP GM23338 ENCFF531QOI 147 bp overlap
ChIP GM23338 ENCFF772DML 187 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 204 bp overlap
ChIP H1 ENCFF764RHO 144 bp overlap
ChIP H9 ENCFF152GTF 232 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 208 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 227 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 232 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 208 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 220 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 200 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 204 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 220 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 232 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 139 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 201 bp overlap
ChIP HCT116 ENCFF003KHP 232 bp overlap
ChIP HCT116 ENCFF209YMI 217 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 150 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 173 bp overlap
ChIP HFFc6 ENCFF005CJI 232 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 191 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 147 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 67 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 139 bp overlap
ChIP HeLa-S3 ENCFF626XQK 197 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 230 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 148 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 115 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 157 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 229 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 190 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 132 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 96 bp overlap
ChIP HepG2 ENCFF127KUP 182 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 194 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 232 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 182 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 138 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 141 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 129 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 111 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 152 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 168 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 128 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 140 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 93 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 145 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 133 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 178 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 112 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 177 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 164 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 220 bp overlap
ChIP K562 ENCFF082GOI 178 bp overlap
ChIP K562 ENCFF400DFR 208 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 232 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 153 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 166 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 156 bp overlap
ChIP LNCAP ENCFF223HIG 232 bp overlap
ChIP LNCAP ENCFF223HIG 165 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 232 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 91 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 232 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 178 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 232 bp overlap
ChIP Loucy ENCFF359TVQ 141 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 232 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 232 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 232 bp overlap
ChIP MCF-7 ENCFF139NQI 232 bp overlap
ChIP MCF-7 ENCFF162GNE 211 bp overlap
ChIP MCF-7 ENCFF198DQX 213 bp overlap
ChIP MCF-7 ENCFF210JUZ 191 bp overlap
ChIP MCF-7 ENCFF414SZG 180 bp overlap
ChIP MCF-7 ENCFF424NQR 185 bp overlap
ChIP MCF-7 ENCFF494VXA 213 bp overlap
ChIP MCF-7 ENCFF844STM 185 bp overlap
ChIP MCF-7 ENCFF954TUV 192 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 232 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 228 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 229 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 224 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 192 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 156 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 171 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 110 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 165 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 232 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 232 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 193 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 232 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 183 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 168 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 105 bp overlap
ChIP MCF-7_fulvestrant-resistant GSE118711.CTCF.MCF-7_fulvestrant-resistant 191 bp overlap
ChIP MCF-7_tamoxifen-resistant GSE118711.CTCF.MCF-7_tamoxifen-resistant 219 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 232 bp overlap
ChIP NB4 ENCFF155DNY 202 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 160 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 166 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 159 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 136 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 212 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 182 bp overlap
ChIP PC-3 ENCFF487TUI 232 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 232 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 201 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 232 bp overlap
ChIP RWPE2 ENCFF911IEE 232 bp overlap
ChIP RWPE2 ENCFF911IEE 232 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 102 bp overlap
ChIP SK-N-SH ENCFF575DMG 232 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 211 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 151 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 199 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 232 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 232 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 189 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 232 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 184 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 232 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 145 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 220 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 223 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 189 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 172 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 125 bp overlap
ChIP VCaP ENCFF858YQT 232 bp overlap
ChIP VCaP ENCFF858YQT 232 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 232 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 168 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 164 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 128 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 219 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 208 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 180 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 175 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 232 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 227 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 178 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 143 bp overlap
ChIP body of pancreas ENCFF798MEO 232 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 232 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 223 bp overlap
ChIP breast epithelium ENCFF341QWO 232 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 232 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 232 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 230 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 172 bp overlap
ChIP chondrocyte ENCFF134ORZ 232 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 230 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 198 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 164 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 221 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 144 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 224 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 193 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 215 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF641PIN 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF677SUG 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 232 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 232 bp overlap
ChIP endodermal cell ENCFF471YCZ 232 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 201 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 144 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 232 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 232 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 229 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 204 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 151 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 158 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 162 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 215 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 232 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 232 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 232 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 232 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 232 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 212 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 226 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 230 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 214 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 221 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 232 bp overlap
ChIP fibroblast of lung ENCFF356FDN 232 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 206 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 206 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 232 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 232 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 164 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 215 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 149 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 135 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 144 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 189 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 91 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 152 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 232 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 230 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 232 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 232 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 226 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 165 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 170 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 132 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 232 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 162 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 190 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 189 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 153 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 195 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 228 bp overlap
ChIP islet ERP004003.CTCF.islet 149 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCFF667ULX 221 bp overlap
ChIP keratinocyte ENCFF805QIE 232 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 232 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 225 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 232 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 214 bp overlap
ChIP keratinocyte_mut1 GSE123711.CTCF.keratinocyte_mut1 186 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 232 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 196 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 232 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 232 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 221 bp overlap
ChIP lung_left_upper-lobe ENCSR972LYL.CTCF.lung_left_upper-lobe 192 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 222 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 227 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 189 bp overlap
ChIP nephron ENCFF411ACD 232 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 232 bp overlap
ChIP neural crest cell ENCFF182LWK 219 bp overlap
ChIP neural progenitor cell ENCFF420RBO 180 bp overlap
ChIP neural progenitor cell ENCFF420RBO 157 bp overlap
ChIP neural progenitor cell ENCFF581WPG 232 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 232 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 121 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 232 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 204 bp overlap
ChIP placenta ENCFF029PHY 232 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 140 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 209 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 193 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 212 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 232 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 232 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 178 bp overlap
ChIP prostate gland ENCFF655GBO 232 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 232 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 189 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 210 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 217 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 231 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 219 bp overlap
ChIP thyroid gland ENCFF163TUI 232 bp overlap
ChIP thyroid gland ENCFF204HWS 232 bp overlap
ChIP thyroid gland ENCFF300RYK 232 bp overlap
ChIP thyroid gland ENCFF631QRY 232 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 232 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 232 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 226 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 184 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 232 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 192 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 232 bp overlap
CTCFL 5 datasets
ChIP FT282 GSE131931.CTCFL.FT282 148 bp overlap
ChIP K-562 ENCSR000BNK.CTCFL.K-562 122 bp overlap
ChIP K562 ENCFF883NXC 171 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 148 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 198 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 232 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 232 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 232 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 232 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 232 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 232 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 232 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 232 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 232 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 232 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 164 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 119 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 153 bp overlap
GRHL1 2 datasets
ChIP MCF-7 GSE140185.GRHL1.MCF-7 232 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.GRHL1.MCF-7_ARID1A-KO 232 bp overlap
GRHL2 10 datasets
ChIP HBE GSE46194.GRHL2.HBE 231 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 232 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 232 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 232 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 232 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 232 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 232 bp overlap
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 231 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 214 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 232 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 170 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 229 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 162 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 107 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 232 bp overlap
PRKDC 1 dataset
ChIP MCF-7_E2 GSE60270.PRKDC.MCF-7_E2 168 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 12 datasets
ChIP H1 ENCFF698EWO 204 bp overlap
ChIP H1 ENCFF967OJF 202 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 104 bp overlap
ChIP MCF-7 ENCFF694KOM 232 bp overlap
ChIP MCF-7 ENCFF724VCQ 232 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 187 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 183 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 137 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 136 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 177 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 146 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 144 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 147 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 232 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 232 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 107 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 206 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 213 bp overlap
SMARCA4 8 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 232 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 224 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT 208 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 232 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 190 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 232 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 133 bp overlap
SMARCB1 5 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 193 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 232 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 232 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 232 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 232 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 214 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 219 bp overlap
SMARCE1 1 dataset
ChIP MCF-7 ENCSR431TLD.SMARCE1.MCF-7 206 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 169 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 157 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 195 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 172 bp overlap
STAT3 8 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 231 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 232 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 232 bp overlap
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 160 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 181 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 213 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 185 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 194 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 212 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 164 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 228 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF75D 2 datasets
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Huangfu Lab · Publications · Resources · Contact