chr13 : 20,848,961 20,849,392
431 bp 64 TFs 0 linked genes
This 431 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:20,843,961 – 20,854,392
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 17 datasets
ChIP LNCaP GSE110655.AR.LNCaP 248 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 231 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 236 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 259 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 256 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 207 bp overlap
ChIP LNCaP_DHT_Bag-1L-CMut GSE89938.AR.LNCaP_DHT_Bag-1L-CMut 256 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 289 bp overlap
ChIP LNCaP_Talen_Veh GSE89938.AR.LNCaP_Talen_Veh 172 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 290 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 259 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 262 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 252 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 327 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 239 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 283 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCFF859UHP 332 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 160 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 261 bp overlap
BRD4 2 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 194 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 229 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 158 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 116 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 117 bp overlap
CREB5 3 datasets
ChIP LNCaP GSE137775.CREB5.LNCaP 185 bp overlap
ChIP SK-N-SH ENCFF144PMI 310 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 275 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 379 bp overlap
EP300 2 datasets
ChIP sigmoid colon ENCFF524QSR 271 bp overlap
ChIP sigmoid colon ENCFF953ZIP 261 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 431 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 221 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 403 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 407 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 178 bp overlap
FOS 1 dataset
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 92 bp overlap
FOXA1 18 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 243 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 350 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 264 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 269 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 128 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 243 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 429 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 242 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 417 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 331 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 297 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 166 bp overlap
ChIP prostate_P25 GSE130408.FOXA1.prostate_P25 212 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 191 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 274 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 335 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 143 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 244 bp overlap
ChIP DE DE-FOXA2-1 431 bp overlap
ChIP DE DE-FOXA2-2 431 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 95 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
GATA2 4 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 280 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 280 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 179 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 140 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 431 bp overlap
ChIP DE DE-GATA4-2 431 bp overlap
ChIP G296S GSE85628.GATA4.G296S 418 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 418 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 352 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 325 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 329 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 223 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 371 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 431 bp overlap
ChIP DE DE-GATA6-2 431 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 431 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 431 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 431 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 431 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 431 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 177 bp overlap
HOXB13 13 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 61 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 86 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 376 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 317 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 259 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 212 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 195 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 237 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 233 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 385 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 270 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 257 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 409 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 409 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 408 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 144 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 357 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 410 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 394 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 431 bp overlap
ChIP leiomyoma_PT1063 GSE128230.JUN.leiomyoma_PT1063 57 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 276 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 159 bp overlap
MED12 3 datasets
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 82 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 182 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 125 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 431 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 431 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 339 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 431 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 383 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 318 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 389 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 331 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 252 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 257 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 193 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 394 bp overlap
POLR2A 4 datasets
ChIP sigmoid colon ENCFF725QFT 288 bp overlap
ChIP sigmoid colon ENCFF748YVT 246 bp overlap
ChIP sigmoid colon ENCFF754JQR 129 bp overlap
ChIP transverse colon ENCFF607LKE 371 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 165 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 410 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 272 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 206 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 431 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 431 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 431 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 431 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 431 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 431 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 431 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 431 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 144 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 62 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 431 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 330 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 320 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 279 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 360 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 389 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 189 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 420 bp overlap
TBX5 10 datasets
ChIP G296S GSE85628.TBX5.G296S 128 bp overlap
ChIP G296S GSE85628.TBX5.G296S 215 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 128 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 215 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 269 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 245 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 245 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 268 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 286 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 262 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 401 bp overlap
TFAP4 1 dataset
ChIP LNCaP GSE28857.TFAP4.LNCaP 166 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 304 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 323 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 349 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 321 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 278 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 213 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 238 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 208 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 321 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 284 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 109 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 63 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 411 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 322 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 148 bp overlap
ZSCAN5C 3 datasets
ChIP HEK293 ENCFF343DTU 278 bp overlap
ChIP HEK293 ENCFF343DTU 310 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 269 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 290 bp overlap