chr12 : 59,323,152 – 59,323,908

756 bp 86 TFs 1 linked gene

This 756 bp open chromatin element is linked to ENSG00000286279 and is bound by 86 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000286279		388 bp	At TSS	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

86 transcription factors

ASCL1 1 dataset

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 104 bp overlap

Bach1::Mafk 1 dataset

Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap

CDX2 1 dataset

Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 79 bp overlap

ELK1::HOXA1 2 datasets

Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap

Motif ES_0h ES_0h-ELK1HOXA1_MA1931.1 14 bp overlap

ELK1::HOXB13 2 datasets

Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap

Motif ES_0h ES_0h-ELK1HOXB13_MA1932.2 15 bp overlap

ETV5::HOXA2 2 datasets

Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap

Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap

EWSR1-FLI1 2 datasets

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap

FIGLA 2 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXF2 1 dataset

Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

FOXK1 1 dataset

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

Foxq1 1 dataset

Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap

GATA6 1 dataset

ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap

GLI3 1 dataset

Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap

GRHL2 1 dataset

Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap

Gli1 1 dataset

Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

HMBOX1 2 datasets

Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap

Motif ES_0h ES_0h-HMBOX1_MA0895.2 7 bp overlap

HOXB2::ELK1 2 datasets

Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap

Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap

JUN 2 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 367 bp overlap

KLF16 1 dataset

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 85 bp overlap

NANOG 2 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 281 bp overlap

NR2C1 2 datasets

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap

NR2C2 2 datasets

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap

NR2F1 3 datasets

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap

Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap

Nr1H2 2 datasets

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 2 datasets

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 2 datasets

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap

Nr2F6 1 dataset

Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap

Nr2f6 2 datasets

Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap

Motif ES_0h ES_0h-Nr2f6_MA0677.2 13 bp overlap

POLR2A 4 datasets

ChIP GM23338 ENCFF450WCS 470 bp overlap

ChIP GM23338 ENCFF450WCS 491 bp overlap

ChIP GM23338 ENCFF450WCS 345 bp overlap

ChIP H1 ENCFF833NJP 187 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 502 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 107 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 300 bp overlap

Pparg::Rxra 2 datasets

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap

SNAI1 1 dataset

Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SP4 1 dataset

ChIP WA01 ENCSR000BQV.SP4.WA01 91 bp overlap

SP8 1 dataset

Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap

SPIB 3 datasets

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap

TCF12 1 dataset

Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap

TEAD1 2 datasets

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap

TEAD2 2 datasets

Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap

Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap

TEAD3 2 datasets

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap

TEAD4 2 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap

TFAP2A 2 datasets

Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap

Motif ES_0h ES_0h-TFAP2A_MA0872.1 13 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

THRB 2 datasets

Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap

Motif ES_0h ES_0h-THRB_MA1574.2 13 bp overlap

VEZF1 1 dataset

Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

Yy1 1 dataset

Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap

ZBTB7B 1 dataset

Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap

ZBTB7C 1 dataset

Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap

ZEB1 2 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZFP42 1 dataset

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

ZNF16 1 dataset

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

ZNF341 1 dataset

Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap

ZNF449 2 datasets

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap

ZNF454 2 datasets

Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap

Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap

ZNF574 2 datasets

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

Motif ES_0h ES_0h-ZNF574_MA1982.2 14 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF740 1 dataset

Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap

ZNF770 1 dataset

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap