chr12 : 47,810,986 47,811,164
178 bp 48 TFs 1 linked gene
This 178 bp open chromatin element is linked to HDAC7 and is bound by 48 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HDAC7 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:47,805,986 – 47,816,164
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 140 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 60 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 178 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 178 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 178 bp overlap
BRD3 2 datasets
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 119 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD3.THP-1_iBET-BD2 107 bp overlap
BRD4 9 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 107 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 133 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 178 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 76 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 178 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 178 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 178 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 162 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 107 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 107 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 178 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 178 bp overlap
CTCF 2 datasets
ChIP testis ENCFF409BGH 178 bp overlap
ChIP transverse colon ENCFF454PBI 74 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 50 bp overlap
ChIP BLaER1 ENCFF335XTP 64 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 161 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 59 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 64 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 93 bp overlap
ETS1 1 dataset
ChIP CD4-pos GSE146787.ETS1.CD4-pos 71 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 178 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 178 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 56 bp overlap
INTS13 1 dataset
ChIP monocyte GSE106359.INTS13.monocyte 63 bp overlap
KMT2A 4 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 178 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 178 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 178 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 130 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 178 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 178 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 178 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 106 bp overlap
MYC 1 dataset
ChIP Raji GSE30726.MYC.Raji 178 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 178 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 178 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 122 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 178 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 140 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 163 bp overlap
ChIP hESC GSE18292.NANOG.hESC 119 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 78 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 149 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 178 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 178 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 153 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 147 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 75 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 103 bp overlap
RELA 1 dataset
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 74 bp overlap
RUNX1 2 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 78 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 125 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF896IJG 178 bp overlap
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 170 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 175 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 108 bp overlap
SMARCA4 2 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 135 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 178 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 171 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 115 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 130 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 114 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 178 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 101 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 178 bp overlap
USF1 3 datasets
ChIP GM12878 ENCFF880HJL 78 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 96 bp overlap
ChIP WTC11 ENCFF699QGS 132 bp overlap
USF2 2 datasets
ChIP GM12878 GSE97661.USF2.GM12878 115 bp overlap
ChIP H1 ENCFF434EDF 64 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 92 bp overlap
YY1 1 dataset
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 103 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 178 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 100 bp overlap