chr12 : 42,364,764 – 42,364,936
172 bp 46 TFs 1 linked gene
This 172 bp open chromatin element is linked to ENSG00000274943 and is bound by 46 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000274943 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:42,359,764 – 42,369,936
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 51 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 76 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 172 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 72 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 109 bp overlap
CTCF 64 datasets
ChIP GM23338 ENCFF531QOI 108 bp overlap
ChIP GM23338 ENCFF772DML 162 bp overlap
ChIP H1 ENCFF764RHO 147 bp overlap
ChIP H9 ENCFF152GTF 143 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 136 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 101 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 98 bp overlap
ChIP HEK293 ENCFF821TIC 172 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 153 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 53 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 172 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 163 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 141 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 114 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 109 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 109 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 97 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 94 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 137 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 115 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 124 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 95 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 124 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 105 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 102 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 111 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 101 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 110 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 133 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 99 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 101 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 86 bp overlap
ChIP K-562_CRISPRi_N4293 GSE131349.CTCF.K-562_CRISPRi_N4293 90 bp overlap
ChIP K-562_CRISPRk_N4293 GSE131349.CTCF.K-562_CRISPRk_N4293 109 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 172 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 116 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 152 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 121 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 104 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 172 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 123 bp overlap
ChIP K-562_sgGal4 GSE132212.CTCF.K-562_sgGal4 127 bp overlap
ChIP K562 ENCFF082GOI 132 bp overlap
ChIP K562 ENCFF111MGE 172 bp overlap
ChIP K562 ENCFF400DFR 166 bp overlap
ChIP K562 ENCFF430KTH 120 bp overlap
ChIP K562 ENCFF598YSU 172 bp overlap
ChIP MCF-7 ENCFF139NQI 171 bp overlap
ChIP MCF-7 ENCFF198DQX 157 bp overlap
ChIP MCF-7 ENCFF414SZG 166 bp overlap
ChIP MCF-7 ENCFF424NQR 158 bp overlap
ChIP MCF-7 ENCFF494VXA 156 bp overlap
ChIP MCF-7 ENCFF844STM 158 bp overlap
ChIP MCF-7 ENCFF954TUV 171 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 138 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 89 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 172 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 162 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 172 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 164 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 91 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 142 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 124 bp overlap
EGR1 8 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 172 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 172 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 146 bp overlap
ChIP K562 ENCFF006PJY 145 bp overlap
ChIP K562 ENCFF113OPQ 167 bp overlap
ChIP K562 ENCFF895KGN 172 bp overlap
ChIP MCF-7 ENCFF679ZBN 137 bp overlap
ChIP MCF-7 ENCSR000BUX.EGR1.MCF-7 134 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 136 bp overlap
FOXA1 4 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 63 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 102 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 94 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 105 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 126 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 172 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 172 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 155 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 75 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 93 bp overlap
ChIP K562 ENCFF348IBL 172 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 72 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 146 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 172 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 172 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 156 bp overlap
KLF4 1 dataset
ChIP MCF-7 ENCFF948KTQ 172 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 151 bp overlap
ChIP K562 ENCFF320EQC 172 bp overlap
MAX 3 datasets
ChIP K562 ENCFF524IJO 172 bp overlap
ChIP MCF-7 ENCFF169IXS 172 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 139 bp overlap
MNT 3 datasets
ChIP MCF-7 ENCFF144ZFZ 172 bp overlap
ChIP MCF-7 ENCFF144ZFZ 94 bp overlap
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 101 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGS.MYC.K-562 79 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 172 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 155 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCFF016MNJ 172 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 172 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 124 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 172 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 111 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 115 bp overlap
ChIP K562 ENCFF066JWO 172 bp overlap
ChIP K562 ENCFF169SQI 127 bp overlap
ChIP K562 ENCFF634XYR 172 bp overlap
ChIP MCF-7 ENCFF694KOM 172 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 105 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 103 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 99 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 98 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 172 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 145 bp overlap
ChIP K562 ENCFF688UKW 172 bp overlap
SMC3 1 dataset
ChIP K562 ENCFF582XIX 128 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 143 bp overlap
ChIP K562 ENCFF059YCJ 172 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 61 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 131 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 138 bp overlap
STAT1 1 dataset
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 102 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 80 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 127 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 146 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 172 bp overlap
ZBTB12 1 dataset
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 92 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 96 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 172 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 172 bp overlap
ChIP K562 ENCFF795CMH 117 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 172 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 172 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 172 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 134 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 127 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 172 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 129 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 68 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 164 bp overlap
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