chr12 : 22,255,112 – 22,255,476
364 bp 49 TFs 1 linked gene
This 364 bp open chromatin element is linked to ST8SIA1 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ST8SIA1 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:22,250,112 – 22,260,476
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 364 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 201 bp overlap
BRD4 6 datasets
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 299 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 267 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 364 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 364 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 257 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 58 bp overlap
CDK8 1 dataset
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 85 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 300 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 201 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 216 bp overlap
CTCF 1 dataset
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 267 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 233 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 207 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 287 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 339 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 343 bp overlap
FOS 2 datasets
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 160 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 175 bp overlap
FOXA1 4 datasets
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 50 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 174 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 78 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 154 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 100 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 280 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 244 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 182 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 193 bp overlap
MAX 4 datasets
ChIP H1 ENCFF601FOM 266 bp overlap
ChIP H1 ENCFF914VQY 320 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 225 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 233 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 91 bp overlap
MITF 2 datasets
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 271 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 98 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 125 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 204 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 246 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 327 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 166 bp overlap
ChIP neural cell ENCFF882LXX 364 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 324 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 297 bp overlap
ChIP K562 ENCFF421AVO 326 bp overlap
ChIP K562 ENCFF809XVG 228 bp overlap
ChIP MCF-7 ENCFF782EZS 310 bp overlap
ChIP MCF-7 ENCFF973QAD 245 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 313 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 307 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 219 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 176 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 364 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 364 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000BIS.SIN3A.WA01 138 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 144 bp overlap
SMARCA4 6 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 168 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 243 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 209 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 364 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 352 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 364 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 171 bp overlap
SMC1A 3 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 115 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 232 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 295 bp overlap
SMC3 2 datasets
ChIP neural cell ENCFF795YGY 311 bp overlap
ChIP neural cell ENCFF795YGY 364 bp overlap
SOX2 4 datasets
ChIP NPC GSE122631.SOX2.NPC 195 bp overlap
ChIP NPC GSE122631.SOX2.NPC 66 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 327 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 191 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 364 bp overlap
STAT3 2 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 188 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 178 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 78 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 197 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 164 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 158 bp overlap
TP63 3 datasets
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 144 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 180 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 166 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 263 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 118 bp overlap
ChIP WA01 GSE39096.YY1.WA01 166 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 204 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 106 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 265 bp overlap
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