chr12 : 11,895,537 11,895,846
309 bp 56 TFs 0 linked genes
This 309 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:11,890,537 – 11,900,846
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 309 bp overlap
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 171 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 142 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 66 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 127 bp overlap
BACH2 1 dataset
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 76 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 68 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 108 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 126 bp overlap
BRD4 9 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 309 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 107 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 309 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 153 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 94 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 102 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 136 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 97 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 120 bp overlap
CDK9 2 datasets
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 133 bp overlap
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 309 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 125 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 100 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 171 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 86 bp overlap
E2F8 2 datasets
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 58 bp overlap
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 126 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 61 bp overlap
ESR1 6 datasets
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 309 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 309 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 309 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 107 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 205 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 309 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 309 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 261 bp overlap
ETS1 2 datasets
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 85 bp overlap
ChIP THP-6_shEts1 GSE138516.ETS1.THP-6_shEts1 141 bp overlap
EVI1 1 dataset
ChIP SKH1_10d GSE87283.EVI1.SKH1_10d 109 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 161 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 294 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 257 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 170 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 258 bp overlap
IRF1 1 dataset
ChIP monocyte_nopretreatment GSE100381.IRF1.monocyte_nopretreatment 125 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 186 bp overlap
MTA3 2 datasets
ChIP GM12878 ENCFF681QPL 309 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 181 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 230 bp overlap
MYOD1 4 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 212 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 140 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 202 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 121 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 154 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 273 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 266 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 130 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 309 bp overlap
PML 2 datasets
ChIP GM12878 ENCFF160JQZ 309 bp overlap
ChIP GM12878 ENCFF160JQZ 238 bp overlap
POLR2A 9 datasets
ChIP GM12878 ENCFF412KAE 152 bp overlap
ChIP GM12878 ENCFF899QYP 244 bp overlap
ChIP GM12891 ENCFF127ICP 182 bp overlap
ChIP GM12892 ENCFF245LYF 259 bp overlap
ChIP GM12892 ENCFF542ZFO 233 bp overlap
ChIP GM15510 ENCFF880HVJ 181 bp overlap
ChIP HL-60 ENCFF321XKE 209 bp overlap
ChIP NB4 ENCFF780KAX 283 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 252 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 163 bp overlap
RBPJ 2 datasets
ChIP THP-6_shCtrl GSE138516.RBPJ.THP-6_shCtrl 242 bp overlap
ChIP THP-6_shEts1 GSE138516.RBPJ.THP-6_shEts1 83 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 89 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 66 bp overlap
SMAD5 1 dataset
ChIP GM12878 ENCFF178LKN 173 bp overlap
SMARCA4 1 dataset
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 309 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 83 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 56 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 99 bp overlap
STAT3 1 dataset
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 176 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 134 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 211 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 249 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 232 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 157 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 175 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 222 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 116 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 163 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 309 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 166 bp overlap