chr11 : 93,819,534 93,820,877
1,343 bp 61 TFs 1 linked gene
This 1.3 kb open chromatin element is linked to VSTM5 and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
VSTM5 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:93,814,534 – 93,825,877
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 352 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 440 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 271 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 163 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 177 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 193 bp overlap
ATF1 2 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 62 bp overlap
ChIP K562 ENCFF817JQF 116 bp overlap
BRD4 5 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 223 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 54 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 788 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 770 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 1154 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 591 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 201 bp overlap
CTCF 5 datasets
ChIP H9 ENCFF152GTF 461 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 152 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 180 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 61 bp overlap
ChIP BLaER1 ENCFF680YXW 247 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
ESR1 3 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 190 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 280 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 218 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF018MKA 804 bp overlap
ChIP neural progenitor cell ENCFF018MKA 794 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 148 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 358 bp overlap
ChIP DE DE-FOXA2-1 551 bp overlap
ChIP DE DE-FOXA2-2 322 bp overlap
ChIP DE DE-FOXA2-2 335 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 286 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 214 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 519 bp overlap
ChIP DE DE-GATA4-2 550 bp overlap
ChIP DE DE-GATA4-2 581 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 355 bp overlap
ChIP DE DE-GATA6-1 465 bp overlap
ChIP DE DE-GATA6-2 1231 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 343 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 511 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 265 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 208 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 386 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 276 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 227 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MAFK 1 dataset
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 116 bp overlap
MAZ 1 dataset
ChIP HeLa-S3 ENCSR000ECL.MAZ.HeLa-S3 116 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 459 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 274 bp overlap
MYOD1 4 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 222 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 373 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 291 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 250 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 341 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 189 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 316 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 342 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 326 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 230 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 160 bp overlap
PAF1 2 datasets
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 149 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 492 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 155 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 537 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 260 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 77 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 149 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 1194 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1329 bp overlap
SOX2 2 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 239 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 138 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 150 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 254 bp overlap
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 228 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 175 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 359 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 165 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 371 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 218 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 281 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 203 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 163 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 153 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 233 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 146 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 180 bp overlap