chr1 : 199,735,739 – 199,735,945

206 bp 60 TFs 0 linked genes

This 206 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

AR 1 dataset

ChIP MCF-7 GSE48930.AR.MCF-7 141 bp overlap

BRD4 1 dataset

ChIP HCT-116 GSE57628.BRD4.HCT-116 187 bp overlap

CDK8 1 dataset

ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 206 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 203 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 181 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 206 bp overlap

CTCF 7 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 150 bp overlap

ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 183 bp overlap

ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 139 bp overlap

ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 206 bp overlap

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 206 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 172 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 186 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 206 bp overlap

EED 1 dataset

ChIP ProEs GSE59087.EED.ProEs 181 bp overlap

EGR3 1 dataset

Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

ELK4 1 dataset

Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap

ERG 3 datasets

ChIP SKNO-1 GSE23730.ERG.SKNO-1 187 bp overlap

ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 187 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 195 bp overlap

ESR1 4 datasets

ChIP MCF-7 GSE68356.ESR1.MCF-7 206 bp overlap

ChIP MCF-7_E2PG GSE68356.ESR1.MCF-7_E2PG 120 bp overlap

ChIP MCF-7_MRNAHIST ERP002305.ESR1.MCF-7_MRNAHIST 110 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 176 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FLI1 2 datasets

ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 143 bp overlap

ChIP SKNO-1 GSE23730.FLI1.SKNO-1 206 bp overlap

GABPA 2 datasets

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

ChIP VCaP GSE49091.GABPA.VCaP 68 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 168 bp overlap

GATA6 1 dataset

ChIP DE_D1 S14-DE-d1-GATA6-exp1 126 bp overlap

HMGB2 1 dataset

ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 206 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

JUN 1 dataset

ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 206 bp overlap

LMO2 1 dataset

ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 194 bp overlap

MED1 1 dataset

ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 158 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MYC 1 dataset

ChIP MCF-7 GSE154941.MYC.MCF-7 206 bp overlap

NR2F2 1 dataset

ChIP liver ENCSR338MMB.NR2F2.liver 153 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 151 bp overlap

Nr2F6 1 dataset

Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap

OSR2 1 dataset

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 165 bp overlap

PHIP 1 dataset

ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 206 bp overlap

POLR2A 1 dataset

ChIP HCT116 ENCFF849NGT 206 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 118 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 154 bp overlap

PPARG 2 datasets

ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 140 bp overlap

ChIP HUVEC-C_PPARG_HYPO GSE50144.PPARG.HUVEC-C_PPARG_HYPO 128 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RAD21 2 datasets

ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 160 bp overlap

ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 206 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 154 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SMARCA4 2 datasets

ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 206 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 206 bp overlap

SMARCB1 2 datasets

ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 124 bp overlap

ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 115 bp overlap

SMARCC1 1 dataset

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 206 bp overlap

SMC1 1 dataset

ChIP HCAEC GSE101921.SMC1.HCAEC 206 bp overlap

STAG2 1 dataset

ChIP HCAEC GSE101921.STAG2.HCAEC 106 bp overlap

STAT3 3 datasets

ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 186 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 167 bp overlap

ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 116 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 182 bp overlap

TCF7L2 2 datasets

ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 206 bp overlap

ChIP HCT116 ENCFF038POZ 184 bp overlap

TEAD4 1 dataset

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 202 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 85 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF28 1 dataset

ChIP HEK293T GSE78099.ZNF28.HEK293T 128 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 110 bp overlap

ZNF770 1 dataset

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap