Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 522 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 136 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 185 bp overlap

BRD4 3 datasets

ChIP BE2C GSE80151.BRD4.BE2C 206 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 206 bp overlap

ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 206 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 95 bp overlap

CHD7 4 datasets

ChIP H1 ENCFF126NLU 524 bp overlap

ChIP H1 ENCFF126NLU 442 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 291 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 407 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 305 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 238 bp overlap

E2F6 2 datasets

Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap

Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 540 bp overlap

EP300 3 datasets

ChIP H1 ENCFF927IYK 297 bp overlap

ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 50 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 146 bp overlap

ESR1 2 datasets

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 303 bp overlap

ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 121 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 265 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 437 bp overlap

EZH2 3 datasets

ChIP neural progenitor cell ENCFF018MKA 436 bp overlap

ChIP neural progenitor cell ENCFF018MKA 588 bp overlap

ChIP neural progenitor cell ENCFF018MKA 492 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 533 bp overlap

ChIP DE DE-FOXA2-2 335 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 377 bp overlap

GATA2 1 dataset

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 250 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 434 bp overlap

ChIP DE DE-GATA4-2 445 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 312 bp overlap

ChIP DE DE-GATA6-2 575 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 586 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 335 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 588 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 587 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 376 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 351 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 364 bp overlap

GRHL2 1 dataset

ChIP LNCaP GSE80256.GRHL2.LNCaP 188 bp overlap

HDAC2 4 datasets

ChIP H1 ENCFF353UJQ 568 bp overlap

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 209 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 140 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

JUN 3 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 509 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 399 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 318 bp overlap

KDM1A 1 dataset

ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 158 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 173 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 210 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 311 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 580 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 222 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 580 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 402 bp overlap

ChIP hESC GSE20650.NANOG.hESC 192 bp overlap

ChIP hESC GSE18292.NANOG.hESC 138 bp overlap

NIPBL 3 datasets

ChIP hESC GSE64758.NIPBL.hESC 183 bp overlap

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 183 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 210 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 245 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 110 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 583 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 411 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 362 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 442 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 317 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 505 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 558 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 422 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 454 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 388 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 477 bp overlap

SOX10 2 datasets

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap

SOX2 2 datasets

ChIP H9 GSE46837.SOX2.H9 156 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 297 bp overlap

SOX4 2 datasets

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap

SP1 2 datasets

ChIP WA01 ENCSR000BIR.SP1.WA01 146 bp overlap

ChIP WTC11 ENCFF688PEU 501 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

Sox5 2 datasets

Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap

Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 412 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 285 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 405 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 245 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 357 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 311 bp overlap

ZNF214 2 datasets

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

Motif ES_0h ES_0h-ZNF214_MA1975.2 13 bp overlap

ZNF232 1 dataset

ChIP WTC11 ENCFF901BGD 461 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 217 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 317 bp overlap

ZNF528 1 dataset

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

Genome Browser