chr1 : 189,929,535 189,930,006
471 bp 42 TFs 0 linked genes
This 471 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:189,924,535 – 189,935,006
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_DMSO_1d GSE90550.AHR.MCF-7_DMSO_1d 156 bp overlap
AR 5 datasets
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 200 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 150 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 213 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 73 bp overlap
ARID1A 5 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 278 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 471 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 336 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 379 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 270 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 214 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 185 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 209 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 266 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 379 bp overlap
CTBP2 1 dataset
ChIP MCF-7 GSE107013.CTBP2.MCF-7 170 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 150 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 203 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 203 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 203 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 243 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 228 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 225 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 307 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 211 bp overlap
FOXA1 30 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 273 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 184 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 252 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 280 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 247 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 244 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 207 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 188 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 133 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 103 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 222 bp overlap
ChIP MCF-7_DSG GSE114737.FOXA1.MCF-7_DSG 167 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 254 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 246 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 197 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 197 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 193 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 265 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 283 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 276 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 291 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 290 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 291 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 333 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 194 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 359 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 403 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 170 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 215 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 166 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF437NQS 367 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 194 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 343 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 262 bp overlap
GRHL1 2 datasets
ChIP MCF-7 GSE140185.GRHL1.MCF-7 361 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.GRHL1.MCF-7_ARID1A-KO 272 bp overlap
GRHL2 7 datasets
ChIP HBE GSE46194.GRHL2.HBE 201 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 340 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 359 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 237 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 366 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 471 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 258 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 263 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 118 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 220 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 276 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 154 bp overlap
JUN 1 dataset
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 471 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 197 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 137 bp overlap
MYCN 4 datasets
ChIP BE2C GSE80151.MYCN.BE2C 194 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 294 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 194 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 137 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 361 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 200 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 166 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 133 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 164 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 271 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 246 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 174 bp overlap
PPARG 1 dataset
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 232 bp overlap
RAD21 3 datasets
ChIP MCF-7 GSE72082.RAD21.MCF-7 182 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 185 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 117 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 135 bp overlap
SMARCA4 3 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 396 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 261 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 393 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 367 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 386 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 403 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 386 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 411 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 471 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE115602.SMC1A.MCF-7 140 bp overlap
STAG1 2 datasets
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 183 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 115 bp overlap
STAT3 4 datasets
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 230 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 250 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 310 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 225 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 320 bp overlap
ZNF217 3 datasets
ChIP MCF-7 ENCFF299BWK 212 bp overlap
ChIP MCF-7 ENCFF299BWK 419 bp overlap
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 367 bp overlap
ZNF24 1 dataset
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 278 bp overlap
ZXDC 1 dataset
ChIP MCF-7 GSE97661.ZXDC.MCF-7 145 bp overlap