chr10 : 65,665,381 – 65,666,254
873 bp 92 TFs 0 linked genes
This 873 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:65,660,381 – 65,671,254
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
Bcl11B 1 dataset
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
CDX1 3 datasets
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
Motif DE_48h DE_48h-CDX1_MA0878.3 10 bp overlap
Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 260 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 420 bp overlap
CDX4 3 datasets
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
Motif DE_48h DE_48h-CDX4_MA1473.2 9 bp overlap
Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap
CEBPD 2 datasets
Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap
Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap
CTNNB1 1 dataset
ChIP LS180 GSE31939.CTNNB1.LS180 162 bp overlap
Crx 3 datasets
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DMRTA2 2 datasets
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
DPRX 3 datasets
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dmbx1 3 datasets
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 1 dataset
Motif DE_36h DE_36h-Dmrt1_MA1603.2 9 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_36h DE_36h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif DE_60h DE_60h-ELK1HOXB13_MA1932.2 15 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 540 bp overlap
ETV3 2 datasets
Motif DE_36h DE_36h-ETV3_MA0763.2 9 bp overlap
Motif DE_60h DE_60h-ETV3_MA0763.2 9 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 674 bp overlap
ChIP DE DE-FOXA2-2 803 bp overlap
GATA1::TAL1 4 datasets
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 7 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP ESF GSE108408.GATA2.ESF 356 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 135 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 192 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 233 bp overlap
GATA3 1 dataset
ChIP SH-SY5Y ENCFF475HYF 363 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 182 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 183 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 707 bp overlap
ChIP DE DE-GATA4-2 873 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 830 bp overlap
ChIP foregut GSE117136.GATA4.foregut 515 bp overlap
GATA5 3 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 788 bp overlap
ChIP AGS GSE51936.GATA6.AGS 208 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 129 bp overlap
ChIP DE DE-GATA6-1 765 bp overlap
ChIP DE DE-GATA6-2 873 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 713 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 873 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 799 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 873 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 873 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 817 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 638 bp overlap
ChIP foregut GSE117136.GATA6.foregut 397 bp overlap
GSC 3 datasets
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HMBOX1 4 datasets
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap
HNF4A 3 datasets
Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap
Motif DE_48h DE_48h-HNF4A_MA1494.2 14 bp overlap
Motif DE_60h DE_60h-HNF4A_MA1494.2 14 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_36h DE_36h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_60h DE_60h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXB9 3 datasets
Motif DE_36h DE_36h-HOXB9_MA1503.2 9 bp overlap
Motif DE_48h DE_48h-HOXB9_MA1503.2 9 bp overlap
Motif DE_60h DE_60h-HOXB9_MA1503.2 9 bp overlap
HOXC10 3 datasets
Motif DE_36h DE_36h-HOXC10_MA0905.2 9 bp overlap
Motif DE_48h DE_48h-HOXC10_MA0905.2 9 bp overlap
Motif DE_60h DE_60h-HOXC10_MA0905.2 9 bp overlap
HOXC12 3 datasets
Motif DE_36h DE_36h-HOXC12_MA0906.2 10 bp overlap
Motif DE_48h DE_48h-HOXC12_MA0906.2 10 bp overlap
Motif DE_60h DE_60h-HOXC12_MA0906.2 10 bp overlap
HOXC9 3 datasets
Motif DE_36h DE_36h-HOXC9_MA0485.3 9 bp overlap
Motif DE_48h DE_48h-HOXC9_MA0485.3 9 bp overlap
Motif DE_60h DE_60h-HOXC9_MA0485.3 9 bp overlap
HOXD10 3 datasets
Motif DE_36h DE_36h-HOXD10_MA1506.2 10 bp overlap
Motif DE_48h DE_48h-HOXD10_MA1506.2 10 bp overlap
Motif DE_60h DE_60h-HOXD10_MA1506.2 10 bp overlap
HOXD12 3 datasets
Motif DE_36h DE_36h-HOXD12_MA0873.2 10 bp overlap
Motif DE_48h DE_48h-HOXD12_MA0873.2 10 bp overlap
Motif DE_60h DE_60h-HOXD12_MA0873.2 10 bp overlap
HOXD12::ELK1 2 datasets
Motif DE_36h DE_36h-HOXD12ELK1_MA1958.2 13 bp overlap
Motif DE_60h DE_60h-HOXD12ELK1_MA1958.2 13 bp overlap
IRF5 1 dataset
Motif DE_48h DE_48h-IRF5_MA1420.1 14 bp overlap
JUN 5 datasets
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 313 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
KLF14 2 datasets
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
KLF5 2 datasets
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 307 bp overlap
Lef1 4 datasets
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Motif DE_48h DE_48h-Lef1_MA0768.3 8 bp overlap
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Lhx3 1 dataset
Motif DE_36h DE_36h-Lhx3_MA0135.2 12 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 3 datasets
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 3 datasets
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap
OTX1 3 datasets
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 159 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
PITX1 3 datasets
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 3 datasets
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
Motif DE_48h DE_48h-PITX2_MA1547.2 8 bp overlap
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 3 datasets
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POU1F1 1 dataset
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
POU3F2 1 dataset
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
POU5F1B 1 dataset
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
PROP1 1 dataset
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
RAD21 1 dataset
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 67 bp overlap
RHOXF1 3 datasets
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RUNX2 1 dataset
Motif DE_48h DE_48h-RUNX2_MA0511.2 9 bp overlap
RUNX3 1 dataset
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
Rhox11 3 datasets
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
Runx1 1 dataset
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 606 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 475 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 324 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 380 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 483 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 559 bp overlap
SOX10 3 datasets
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 406 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 514 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 143 bp overlap
SP4 2 datasets
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP8 2 datasets
Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
TBX20 2 datasets
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TCF4 2 datasets
ChIP LS180 GSE31939.TCF4.LS180 160 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 196 bp overlap
TCF7 4 datasets
Motif DE_36h DE_36h-TCF7_MA0769.3 7 bp overlap
Motif DE_36h DE_36h-TCF7_MA0769.3 7 bp overlap
Motif DE_48h DE_48h-TCF7_MA0769.3 7 bp overlap
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
TFEB 3 datasets
Motif DE_36h DE_36h-TFEB_MA0692.2 8 bp overlap
Motif DE_48h DE_48h-TFEB_MA0692.2 8 bp overlap
Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZFP42 3 datasets
Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap
Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
ZNF135 1 dataset
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
ZNF175 2 datasets
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap
ZNF558 1 dataset
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF667 6 datasets
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
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