chr10 : 28,459,483 28,460,059
576 bp 45 TFs 4 linked genes
This 576 bp open chromatin element is linked to 4 target genes and is bound by 45 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
WAC-AS1 73.0 kb Distal Multiome
WAC 73.3 kb Distal Multiome
MPP7 156.7 kb Distal Multiome
BAMBI 217.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:28,454,483 – 28,465,059
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 115 bp overlap
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 222 bp overlap
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 188 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 367 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 544 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 349 bp overlap
BRD4 4 datasets
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 237 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 208 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 275 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 237 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 259 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 328 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 334 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 190 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 203 bp overlap
ESR1 1 dataset
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 155 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 453 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 90 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 96 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 101 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 237 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 214 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 276 bp overlap
ChIP DE DE-GATA6-2 370 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
IRF4 2 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 111 bp overlap
ChIP BC-3 GSE132777.IRF4.BC-3 263 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 132 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 187 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 93 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 194 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 442 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 285 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 233 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 407 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 422 bp overlap
ChIP H1 ENCFF566JSR 576 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 380 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 151 bp overlap
RAD21 2 datasets
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 298 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 150 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 576 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 481 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR820GND.RNF2.K-562 254 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 237 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 125 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 226 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 330 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 446 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 278 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 354 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 141 bp overlap
SPI1 6 datasets
ChIP HL-60 ENCFF645GBT 135 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 151 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 89 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 93 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 73 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 119 bp overlap
STAT5A 1 dataset
ChIP MV4-11 GSE64862.STAT5A.MV4-11 143 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 465 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 129 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 306 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 421 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 172 bp overlap