chr10 : 3,295,348 – 3,295,799
451 bp 60 TFs 0 linked genes
This 451 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:3,290,348 – 3,300,799
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 16 datasets
ChIP LNCaP GSE110655.AR.LNCaP 92 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 139 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 92 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 118 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 204 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 92 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 158 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 136 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 306 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 146 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 77 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 53 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 107 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 118 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 60 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 58 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 451 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 150 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 61 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 119 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 145 bp overlap
BRD4 6 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 222 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 309 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 302 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 451 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 451 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 95 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 389 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 83 bp overlap
CTCF 6 datasets
ChIP 22Rv1 ENCFF466OXN 56 bp overlap
ChIP 22Rv1 ENCFF466OXN 291 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 92 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 93 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 51 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 81 bp overlap
CUX1 1 dataset
ChIP MCF-7 ENCSR017CEO.CUX1.MCF-7 188 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCFF692OYJ 123 bp overlap
ESR1 4 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 55 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 134 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 55 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 113 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 342 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 112 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 141 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 99 bp overlap
FOXA1 37 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 75 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 84 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 70 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 71 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 60 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 195 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 64 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 72 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 120 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 132 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 55 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 65 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 136 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 95 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 164 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 57 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 54 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 52 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 69 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 79 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 128 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 62 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 407 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 319 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 70 bp overlap
ChIP breast_tumor_Male_1 GSE104399.FOXA1.breast_tumor_Male_1 235 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 298 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 231 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 178 bp overlap
ChIP breast_tumor_Male_6 GSE104399.FOXA1.breast_tumor_Male_6 155 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 198 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 119 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 71 bp overlap
ChIP prostate_P19_T GSE130408.FOXA1.prostate_P19_T 51 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 140 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 234 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 151 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 291 bp overlap
GATA3 2 datasets
ChIP T-47D ENCSR000BMX.GATA3.T-47D 144 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 80 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 265 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 204 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 383 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 223 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 60 bp overlap
HOXB13 11 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 86 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 69 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 219 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 212 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 160 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 96 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 125 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 253 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 69 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 73 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 74 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 143 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 134 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 91 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 112 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 299 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 155 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 67 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 311 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 268 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 359 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 115 bp overlap
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 158 bp overlap
PGR 7 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 331 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 96 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 66 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 176 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 63 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 138 bp overlap
ChIP breast_tumor_Male_30 GSE104399.PGR.breast_tumor_Male_30 302 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 451 bp overlap
RNF2 2 datasets
ChIP Hep-G2 ENCSR523XCR.RNF2.Hep-G2 100 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 221 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 312 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 172 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 145 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 317 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 330 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 78 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 334 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 218 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 346 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 278 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 98 bp overlap
SMARCC1 1 dataset
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 451 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 99 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 305 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 279 bp overlap
STAT3 4 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 151 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 235 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 182 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 101 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 137 bp overlap
TEAD4 1 dataset
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 291 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 184 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 101 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 211 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 329 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 309 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 182 bp overlap
ZIC2 2 datasets
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 157 bp overlap
ChIP HEK293 ENCFF033NQQ 100 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 56 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 113 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 255 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 211 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 173 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 138 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 368 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 68 bp overlap
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