chr9 : 110,728,099 110,728,358
259 bp 45 TFs 1 linked gene
This 259 bp open chromatin element is linked to MUSK and is bound by 45 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MUSK at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:110,723,099 – 110,733,358
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 259 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 259 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 247 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 232 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 161 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 164 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 259 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 130 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 139 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 259 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 180 bp overlap
EP300 4 datasets
ChIP H1 ENCFF927IYK 138 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 255 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 225 bp overlap
ChIP hESC GSE17917.EP300.hESC 131 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 259 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 259 bp overlap
ChIP DE DE-FOXA2-2 259 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 259 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 259 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 259 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 205 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 259 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 236 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 222 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 259 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 148 bp overlap
KLF5 1 dataset
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 191 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 220 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 259 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 255 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 259 bp overlap
ChIP hESC GSE18292.NANOG.hESC 223 bp overlap
ChIP hESC GSE20650.NANOG.hESC 183 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 156 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 228 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 259 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 243 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 203 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 134 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 121 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 259 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 249 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 145 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 245 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 259 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 118 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMARCA4 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 201 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 170 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 190 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 125 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 182 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 259 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 256 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 225 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 195 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 209 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 247 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 198 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 179 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 171 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 250 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 258 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 232 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 241 bp overlap