chr1 : 180,098,193 180,098,599
406 bp 58 TFs 0 linked genes
This 406 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:180,093,193 – 180,103,599
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 168 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 116 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 223 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 244 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 236 bp overlap
BRD2 1 dataset
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 292 bp overlap
BRD4 15 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 221 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 56 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 318 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 253 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 91 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 406 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 324 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 148 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 289 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 356 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 244 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 312 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 280 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 337 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 327 bp overlap
CEBPA 3 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 209 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 107 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 126 bp overlap
CEBPB 13 datasets
ChIP A549 ENCFF797MXZ 102 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 98 bp overlap
ChIP HeLa-S3 ENCFF722WEG 74 bp overlap
ChIP HepG2 ENCFF536NTI 56 bp overlap
ChIP IMR-90 ENCFF468UGY 55 bp overlap
ChIP K562 ENCFF189VBN 65 bp overlap
ChIP K562 ENCFF584CTB 221 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 209 bp overlap
ChIP THP-1_NS1-Pam3csk-0h GSE103477.CEBPB.THP-1_NS1-Pam3csk-0h 139 bp overlap
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 141 bp overlap
ChIP THP-1_eGFP-Pam3csk-0h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-0h 81 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 104 bp overlap
ChIP hMSC GSE68864.CEBPB.hMSC 61 bp overlap
CEBPD 1 dataset
ChIP HAEC_IL1b_4h GSE89970.CEBPD.HAEC_IL1b_4h 50 bp overlap
CEBPG 4 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 124 bp overlap
ChIP K-562 ENCSR490LWA.CEBPG.K-562 111 bp overlap
ChIP K562 ENCFF783ADE 200 bp overlap
ChIP K562 ENCFF956TPS 154 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 267 bp overlap
Cebpa 7 datasets
ChIP BLaER1 ENCFF093OYK 170 bp overlap
ChIP BLaER1 ENCFF274GAT 128 bp overlap
ChIP BLaER1 ENCFF364PUR 128 bp overlap
ChIP BLaER1 ENCFF374ODN 200 bp overlap
ChIP BLaER1 ENCFF460KDD 207 bp overlap
ChIP BLaER1 ENCFF844FIP 161 bp overlap
ChIP BLaER1 ENCFF896HSY 276 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 238 bp overlap
EP300 4 datasets
ChIP HeLa-S3 ENCFF089VPQ 325 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 199 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 168 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 51 bp overlap
ESR1 2 datasets
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 52 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 128 bp overlap
FOS 4 datasets
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 53 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 70 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 65 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.FOS.THP-1_eGFP-Pam3csk-4h 120 bp overlap
FOSL1 2 datasets
ChIP BT-549 GSE112961.FOSL1.BT-549 357 bp overlap
ChIP BT-549 GSE46166.FOSL1.BT-549 327 bp overlap
FOSL2 3 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 93 bp overlap
ChIP A549 ENCFF195CES 162 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 91 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 292 bp overlap
ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 67 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 98 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 171 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 406 bp overlap
ChIP DE DE-FOXA2-2 406 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 406 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 406 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 406 bp overlap
FOXL2 1 dataset
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 146 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 169 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 216 bp overlap
GATA2 4 datasets
ChIP ESF GSE108408.GATA2.ESF 353 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 231 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 265 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 369 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 406 bp overlap
ChIP DE DE-GATA4-2 406 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 348 bp overlap
ChIP DE DE-GATA6-2 369 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 327 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 338 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 340 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 356 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 315 bp overlap
GTF2F1 2 datasets
ChIP HeLa-S3 ENCFF868VGE 361 bp overlap
ChIP HeLa-S3 ENCFF868VGE 272 bp overlap
GTF3C2 4 datasets
ChIP HeLa-S3 ENCFF144RTV 102 bp overlap
ChIP HeLa-S3 ENCSR000DNY.GTF3C2.HeLa-S3 179 bp overlap
ChIP T98G GSE120162.GTF3C2.T98G 389 bp overlap
ChIP T98G_serum GSE120162.GTF3C2.T98G_serum 152 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 78 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 338 bp overlap
HOXB13 1 dataset
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 63 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 305 bp overlap
JUN 8 datasets
ChIP 786-O GSE86092.JUN.786-O 71 bp overlap
ChIP BT-549 GSE46166.JUN.BT-549 110 bp overlap
ChIP HeLa-S3 ENCFF668QVP 148 bp overlap
ChIP HeLa-S3 ENCSR000EDG.JUN.HeLa-S3 61 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 406 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 155 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 55 bp overlap
ChIP primary-lung-fibroblast_OE GSE114844.JUN.primary-lung-fibroblast_OE 63 bp overlap
JUNB 2 datasets
ChIP A549 ENCFF251BPG 158 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 67 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 77 bp overlap
KDM1A 1 dataset
ChIP K-562 ENCSR360HRA.KDM1A.K-562 234 bp overlap
MAX 2 datasets
ChIP HeLa-S3 ENCFF398RFF 161 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 60 bp overlap
MED1 3 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 142 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 91 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 128 bp overlap
POLR2A 4 datasets
ChIP stomach ENCFF607ZPU 130 bp overlap
ChIP transverse colon ENCFF607LKE 148 bp overlap
ChIP transverse colon ENCFF610RWV 144 bp overlap
ChIP vagina ENCFF305NWS 183 bp overlap
POLR3A 1 dataset
ChIP HeLa-S3 ENCFF777TAS 286 bp overlap
PRDM1 1 dataset
ChIP HeLa-S3 ENCFF893HDJ 61 bp overlap
RAD21 2 datasets
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 79 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 61 bp overlap
RCOR1 1 dataset
ChIP HeLa-S3 ENCFF471KYI 167 bp overlap
RFX5 1 dataset
ChIP HeLa-S3 ENCFF703XPB 114 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 188 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 393 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 288 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 296 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 406 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 361 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 106 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 70 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 228 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 291 bp overlap
STAT3 2 datasets
ChIP HeLa-S3 ENCSR000EDC.STAT3.HeLa-S3 166 bp overlap
ChIP HepaRG_sodium-oleate GSE89157.STAT3.HepaRG_sodium-oleate 143 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 203 bp overlap
TBP 2 datasets
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 197 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 61 bp overlap
TCF7L2 4 datasets
ChIP HeLa-S3 ENCFF673QAB 395 bp overlap
ChIP HeLa-S3 ENCSR000EVE.TCF7L2.HeLa-S3 406 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 255 bp overlap
ChIP Panc1 ENCFF829HHL 406 bp overlap
TEAD4 1 dataset
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 77 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 98 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 139 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 406 bp overlap