chr9 : 92,745,472 – 92,746,004
532 bp 60 TFs 4 linked genes
This 532 bp open chromatin element is linked to 4 target genes and is bound by 60 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
BICD2 19.2 kb Distal Multiome
ENSG00000291168 63.9 kb Distal Multiome
IPPK 75.5 kb Distal Multiome
ZNF484 132.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:92,740,472 – 92,751,004
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 100 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 164 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 405 bp overlap
BRD4 2 datasets
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 74 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 215 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 229 bp overlap
CTCF 6 datasets
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 320 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 532 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 302 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 120 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 279 bp overlap
DACH1 1 dataset
ChIP K562 ENCFF574LOW 274 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 323 bp overlap
EGR1 4 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 168 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 113 bp overlap
ChIP K562 ENCFF006PJY 190 bp overlap
ChIP K562 ENCFF895KGN 262 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 258 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 340 bp overlap
ChIP DE DE-FOXA2-2 362 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 109 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 109 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP erythroblast ENCFF867JAR 336 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 178 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 174 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 381 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 420 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 384 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 401 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 382 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 288 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 422 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 388 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 334 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 179 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 201 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 106 bp overlap
IKZF1 3 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 154 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 519 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 434 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 222 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 295 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 59 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 130 bp overlap
LEF1 1 dataset
ChIP K-562 ENCSR343ELW.LEF1.K-562 206 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 258 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 130 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 310 bp overlap
MYB 3 datasets
ChIP DU528 GSE94000.MYB.DU528 153 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 248 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 214 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 54 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 360 bp overlap
ChIP K-562 ENCSR986CDX.NEUROD1.K-562 154 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 99 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 249 bp overlap
NR3C1 1 dataset
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 159 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 166 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 344 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 294 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 189 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 312 bp overlap
SMAD1 1 dataset
ChIP K-562 ENCSR038DJJ.SMAD1.K-562 174 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 375 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 316 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 281 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 313 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 323 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 220 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 273 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 109 bp overlap
STAT3 1 dataset
ChIP HepaRG_sodium-oleate GSE89157.STAT3.HepaRG_sodium-oleate 143 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 196 bp overlap
TAL1 6 datasets
ChIP CD34 GSE52924.TAL1.CD34 186 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 256 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 270 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 228 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 171 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 185 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 172 bp overlap
ChIP K562 ENCFF319QZT 304 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 295 bp overlap
TCF7 2 datasets
ChIP K-562 ENCSR863KUB.TCF7.K-562 191 bp overlap
ChIP K562 ENCFF372PUR 279 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 184 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 311 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 131 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 173 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 64 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 222 bp overlap
ChIP K562 ENCFF053XDV 448 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 197 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 90 bp overlap
ZNF320 1 dataset
ChIP HEK293 GSE76494.ZNF320.HEK293 56 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 169 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 179 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 374 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 285 bp overlap
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