chr8 : 142,210,348 – 142,211,174
826 bp 73 TFs 1 linked gene
This 826 bp open chromatin element is linked to TSNARE1 and is bound by 73 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TSNARE1 192.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:142,205,348 – 142,216,174
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 217 bp overlap
ASCL1 11 datasets
ChIP G523NS_Dox GSE87618.ASCL1.G523NS_Dox 128 bp overlap
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 107 bp overlap
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 153 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 112 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 144 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 116 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 141 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 166 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 190 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 232 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 142 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 194 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF521IZR 196 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 303 bp overlap
BRD4 14 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 443 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 482 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 126 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 166 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 263 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 80 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 102 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 69 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 349 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 354 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 456 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 370 bp overlap
ChIP hESC GSE33281.BRD4.hESC 90 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 585 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 90 bp overlap
CTCF 4 datasets
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HCT116 ENCFF209YMI 240 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP endodermal cell ENCFF471YCZ 320 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 406 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 320 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 196 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 268 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 180 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 285 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 150 bp overlap
ESR1 15 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 68 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 244 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 59 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 211 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 149 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 259 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 65 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 75 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 246 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 169 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 234 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 234 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 155 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 199 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 291 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 363 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 210 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 146 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 336 bp overlap
FEZF2 1 dataset
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 204 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 464 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 355 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 457 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 342 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 377 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 455 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 366 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 267 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 826 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 156 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 320 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 315 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 144 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 227 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 337 bp overlap
MAX 4 datasets
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 390 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 648 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 707 bp overlap
MITF 3 datasets
ChIP 501-mel GSE137522.MITF.501-mel 371 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 380 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 466 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 651 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 537 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 488 bp overlap
MYC 3 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 291 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 522 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 593 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 215 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 127 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 226 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 183 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 149 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 103 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 174 bp overlap
NOTCH1 2 datasets
ChIP CUTLL1 GSE29600.NOTCH1.CUTLL1 145 bp overlap
ChIP HPBALL GSE39263.NOTCH1.HPBALL 180 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 232 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 331 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 333 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 202 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 158 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 405 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 191 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 359 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 717 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 556 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 559 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 302 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 351 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 292 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 723 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 594 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 296 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 109 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 388 bp overlap
SP4 1 dataset
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 298 bp overlap
SS18 3 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 456 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 455 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 603 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 264 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 380 bp overlap
TBP 1 dataset
ChIP ME-1 GSE46044.TBP.ME-1 207 bp overlap
TP63 2 datasets
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 93 bp overlap
TRIM24 1 dataset
ChIP LNCaP_DHT GSE69331.TRIM24.LNCaP_DHT 299 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 228 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 228 bp overlap
USF1 8 datasets
ChIP H1 ENCFF090WVU 143 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 108 bp overlap
ChIP HepG2 ENCFF201JKA 337 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 115 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 133 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 200 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 247 bp overlap
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 5 datasets
ChIP GM12878 GSE97661.USF2.GM12878 203 bp overlap
ChIP H1 ENCFF434EDF 277 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 208 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 175 bp overlap
ChIP WTC11 ENCFF139JAW 172 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 167 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 611 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 155 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 180 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 338 bp overlap
ZNF213 1 dataset
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_48h DE_48h-ZNF263_MA0528.3 7 bp overlap
ZNF547 1 dataset
Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap
ZNF770 1 dataset
Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 290 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 143 bp overlap
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