chr8 : 42,621,025 – 42,621,434
409 bp 63 TFs 0 linked genes
This 409 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:42,616,025 – 42,626,434
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
BARHL1 1 dataset
Motif DE_24h DE_24h-BARHL1_MA0877.4 6 bp overlap
BARHL2 1 dataset
Motif DE_24h DE_24h-BARHL2_MA0635.2 6 bp overlap
BRD3 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 60 bp overlap
BRD4 1 dataset
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 63 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CTCF 7 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 77 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 145 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 127 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 278 bp overlap
ChIP BLaER1 ENCFF274GAT 115 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
ELF1 4 datasets
ChIP A-549 GSE122203.ELF1.A-549 109 bp overlap
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 170 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 155 bp overlap
GABPA 2 datasets
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 140 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 167 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 334 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 311 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 316 bp overlap
HNF1B 2 datasets
ChIP H9 ERP004206.HNF1B.H9 300 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 341 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 61 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 245 bp overlap
ChIP K562 ENCFF771OHZ 303 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 292 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 409 bp overlap
NFYA 2 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif DE_24h DE_24h-NFYA_MA0060.4 8 bp overlap
NFYB 2 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif DE_24h DE_24h-NFYB_MA0502.3 9 bp overlap
NFYC 2 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif DE_24h DE_24h-NFYC_MA1644.2 7 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 279 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 248 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 409 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 59 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 123 bp overlap
RARA::RXRA 2 datasets
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_24h DE_24h-RARARXRA_MA0159.1 17 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 242 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 366 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 307 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 278 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 348 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 309 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 161 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 292 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 294 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 54 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 112 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 90 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
Stat6 2 datasets
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
Motif DE_24h DE_24h-Stat6_MA0520.2 10 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 105 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 106 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 172 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR385AHH.ZNF24.K-562 148 bp overlap
ZNF263 1 dataset
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif DE_24h DE_24h-ZNF341_MA1655.2 8 bp overlap
ZNF384 1 dataset
ChIP K-562 ENCSR000EFP.ZNF384.K-562 189 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF677 2 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif DE_24h DE_24h-ZNF677_MA2101.1 12 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_24h DE_24h-ZNF708_MA1730.2 9 bp overlap
ZNF75A 2 datasets
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_24h DE_24h-ZNF75A_MA2097.1 12 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
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