chr6 : 125,356,923 – 125,357,208

285 bp 67 TFs 0 linked genes

This 285 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

67 transcription factors

BCL6 1 dataset

ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 216 bp overlap

BRD4 1 dataset

ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 55 bp overlap

Bach1::Mafk 1 dataset

Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap

CDK7 1 dataset

ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 285 bp overlap

CHD4 1 dataset

ChIP 501-mel GSE134848.CHD4.501-mel 285 bp overlap

EBF1 2 datasets

ChIP LCL GSE75503.EBF1.LCL 218 bp overlap

ChIP MUTUL GSE75503.EBF1.MUTUL 263 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 181 bp overlap

EP300 3 datasets

ChIP neural ENCSR843ZUP.EP300.neural 226 bp overlap

ChIP neural cell ENCFF442QNK 285 bp overlap

ChIP neural cell ENCFF442QNK 61 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 285 bp overlap

FOXA1 1 dataset

ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 62 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 177 bp overlap

ChIP DE DE-FOXA2-2 182 bp overlap

GATA6 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 104 bp overlap

GCM1 1 dataset

Motif DE_36h DE_36h-GCM1_MA0646.2 10 bp overlap

MAF::NFE2 1 dataset

Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap

MAX 1 dataset

ChIP P493-6 GSE36354.MAX.P493-6 213 bp overlap

MED1 1 dataset

ChIP P493-6 GSE36354.MED1.P493-6 99 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MGA 1 dataset

Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap

MYC 1 dataset

ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 179 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 233 bp overlap

NKX2-1 1 dataset

ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 132 bp overlap

NOTCH1 1 dataset

ChIP GSC8-11_dasatinib GSE74557.NOTCH1.GSC8-11_dasatinib 153 bp overlap

NR3C1 1 dataset

ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 228 bp overlap

Nfe2l2 1 dataset

Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap

PAX5 1 dataset

ChIP NALM-6 GSE126300.PAX5.NALM-6 216 bp overlap

PBX1 2 datasets

Motif DE_24h DE_24h-PBX1_MA0070.2 9 bp overlap

ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 285 bp overlap

PBX3 1 dataset

Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap

PKNOX1 3 datasets

Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap

ChIP GM12878 ENCFF589FCY 285 bp overlap

ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 206 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 255 bp overlap

POU1F1 1 dataset

Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap

POU5F1 3 datasets

Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 285 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 285 bp overlap

POU5F1B 1 dataset

Motif DE_24h DE_24h-POU5F1B_MA0792.1 9 bp overlap

Prdm4 1 dataset

Motif DE_24h DE_24h-Prdm4_MA1647.3 11 bp overlap

RAD21 1 dataset

ChIP neural ENCSR198ZYJ.RAD21.neural 190 bp overlap

RBPJ 1 dataset

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 163 bp overlap

RFX2 1 dataset

Motif DE_24h DE_24h-RFX2_MA0600.3 14 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 233 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 254 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 222 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 195 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 127 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 244 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 187 bp overlap

SMARCA4 4 datasets

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 285 bp overlap

ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 250 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 237 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 192 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 127 bp overlap

SND1 1 dataset

ChIP NHEK GSE29498.SND1.NHEK 128 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 193 bp overlap

Stat5a 1 dataset

Motif DE_24h DE_24h-Stat5a_MA1624.2 9 bp overlap

TBX1 1 dataset

Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap

TBX21 1 dataset

Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap

TBX5 1 dataset

Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap

TRIM28 1 dataset

ChIP HEK293 ENCFF265CEM 285 bp overlap

Tbx6 1 dataset

Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap

XBP1 1 dataset

ChIP plasmablast GSE142493.XBP1.plasmablast 225 bp overlap

ZFP14 1 dataset

Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 123 bp overlap

ZNF184 1 dataset

Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap

ZSCAN4 1 dataset

Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap