chr6 : 117,272,033 – 117,272,600
567 bp 68 TFs 2 linked genes
This 567 bp open chromatin element is linked to VGLL2 and ENSG00000287253 and is bound by 68 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
VGLL2 6.5 kb Proximal Proximity
ENSG00000287253 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:117,267,033 – 117,277,600
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 275 bp overlap
BRD4 2 datasets
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 172 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 85 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 353 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Cebpa 6 datasets
ChIP BLaER1 ENCFF031ISE 195 bp overlap
ChIP BLaER1 ENCFF262VBH 187 bp overlap
ChIP BLaER1 ENCFF335XTP 147 bp overlap
ChIP BLaER1 ENCFF374ODN 263 bp overlap
ChIP BLaER1 ENCFF460KDD 202 bp overlap
ChIP BLaER1 ENCFF896HSY 245 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EGR1 1 dataset
ChIP K-562 ENCSR024CNP.EGR1.K-562 198 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 418 bp overlap
ETV5::FIGLA 1 dataset
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 20 datasets
ChIP A673 ENCFF955JRZ 187 bp overlap
ChIP GM23338 ENCFF613YON 139 bp overlap
ChIP H1 ENCFF232NZA 567 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 179 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 265 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 544 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 534 bp overlap
ChIP astrocyte ENCFF365JTP 456 bp overlap
ChIP astrocyte ENCFF365JTP 567 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 359 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 239 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 547 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 412 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 567 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 407 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 442 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 278 bp overlap
ChIP keratinocyte ENCFF070STK 240 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 400 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 199 bp overlap
GLI3 1 dataset
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
GLIS1 1 dataset
Motif DE_12h DE_12h-GLIS1_MA0735.2 15 bp overlap
Gli1 1 dataset
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 214 bp overlap
HNRNPK 2 datasets
ChIP HepG2 ENCFF493GNS 240 bp overlap
ChIP HepG2 ENCFF826MXP 240 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 567 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 263 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 397 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 59 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 525 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 252 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 150 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 197 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
ChIP WA01 ENCSR000EBS.MAFK.WA01 139 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 216 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 219 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 172 bp overlap
MYOD1 7 datasets
ChIP RD GSE137168.MYOD1.RD 208 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 134 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 260 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 221 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 172 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 167 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 156 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 475 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 297 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 136 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 136 bp overlap
POLR2A 1 dataset
ChIP gastrocnemius medialis ENCFF145VIB 419 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 414 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 109 bp overlap
Pparg::Rxra 1 dataset
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 3 datasets
ChIP RH4 GSE83726.RAD21.RH4 162 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 175 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 94 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 238 bp overlap
RNF2 3 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 379 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 150 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 433 bp overlap
RUNX1 2 datasets
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 199 bp overlap
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 50 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 313 bp overlap
SPI1 1 dataset
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 217 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
SUZ12 4 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 499 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 567 bp overlap
ChIP H1 ENCFF881NFR 519 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 126 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 53 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 279 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 204 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 419 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 288 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 386 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF467 2 datasets
ChIP HEK293 GSE76494.ZNF467.HEK293 167 bp overlap
ChIP HEK293 GSE76494.ZNF467.HEK293 149 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 359 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
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