chr6 : 111,033,760 111,034,293
533 bp 47 TFs 6 linked genes
This 533 bp open chromatin element is linked to 6 target genes and is bound by 47 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
RPF2 52.0 kb Distal Multiome
SLC16A10 53.5 kb Distal Multiome
GTF3C6 75.3 kb Distal Multiome
AMD1 159.3 kb Distal Multiome
CDK19 218.6 kb Distal Multiome
MFSD4B 225.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:111,028,760 – 111,039,293
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 519 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 245 bp overlap
BCL11A 1 dataset
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 210 bp overlap
ChIP BLaER1 ENCFF364PUR 188 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELK1 1 dataset
Motif DE_12h DE_12h-ELK1_MA0028.3 9 bp overlap
ELK3 1 dataset
Motif DE_12h DE_12h-ELK3_MA0759.3 9 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
ETS1 1 dataset
ChIP GM23338 ENCFF701IZH 377 bp overlap
ETV4 1 dataset
Motif DE_12h DE_12h-ETV4_MA0764.4 9 bp overlap
ETV6 2 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
ChIP WTC11 ENCFF812SCD 437 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA1::TAL1 2 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_24h DE_24h-GATA1TAL1_MA0140.3 17 bp overlap
GRHL2 2 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Motif DE_24h DE_24h-GRHL2_MA1105.3 8 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif DE_24h DE_24h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif DE_24h DE_24h-Gli2_MA0734.4 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 294 bp overlap
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
NFYC 1 dataset
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
POU5F1 1 dataset
ChIP GM23338 ENCFF333SNB 311 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 465 bp overlap
ChIP H1 ENCFF905HFL 257 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Six4 1 dataset
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
TFCP2 2 datasets
Motif DE_12h DE_12h-TFCP2_MA1968.2 9 bp overlap
Motif DE_24h DE_24h-TFCP2_MA1968.2 9 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 117 bp overlap
ChIP Ishikawa ENCFF728IEG 261 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 179 bp overlap
ChIP WTC11 ENCFF699QGS 374 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 373 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZNF189 1 dataset
Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 256 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
Zbtb2 1 dataset
Motif DE_12h DE_12h-Zbtb2_MA2340.1 10 bp overlap