chr6 : 72,206,660 72,206,914
254 bp 93 TFs 0 linked genes
This 254 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:72,201,660 – 72,211,914
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 192 bp overlap
ARGFX 1 dataset
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
Alx1 1 dataset
Motif DE_12h DE_12h-Alx1_MA0854.2 8 bp overlap
Alx4 1 dataset
Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap
Arid3b 1 dataset
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
Arx 1 dataset
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
CTCF 22 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM23338 ENCFF531QOI 238 bp overlap
ChIP H1 ENCFF764RHO 250 bp overlap
ChIP H9 ENCFF152GTF 222 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 169 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 206 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 206 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 156 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 189 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 170 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 107 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 198 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 94 bp overlap
ChIP endodermal cell ENCFF471YCZ 234 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 248 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 200 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 188 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 219 bp overlap
ChIP neural progenitor cell ENCFF420RBO 254 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 175 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 135 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
ESX1 1 dataset
Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 217 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXB1 1 dataset
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MEF2B 1 dataset
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MEOX1 1 dataset
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NOTO 1 dataset
Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PAX4 1 dataset
Motif DE_12h DE_12h-PAX4_MA0068.2 8 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 195 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
TP53 3 datasets
ChIP H9 GSE142050.TP53.H9 157 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 131 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
mix-a 1 dataset
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap