chr6 : 69,631,450 69,632,113
663 bp 76 TFs 0 linked genes
This 663 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:69,626,450 – 69,637,113
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 226 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BRD4 5 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 375 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 187 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 482 bp overlap
ChIP SEM GSE83671.BRD4.SEM 185 bp overlap
CBFB 3 datasets
ChIP GM12878 ENCFF056JUS 491 bp overlap
ChIP GM12878 ENCFF056JUS 362 bp overlap
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 389 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 220 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 262 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
EED 2 datasets
ChIP GM12878 ENCFF266FYW 485 bp overlap
ChIP GM12878 ENCFF266FYW 360 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 147 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 454 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 231 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 221 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 135 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOXM1 3 datasets
ChIP GM12878 ENCFF264DJE 404 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 145 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 145 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GABPA 1 dataset
ChIP GM12878 ENCFF872TWR 401 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 178 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 373 bp overlap
ChIP DE DE-GATA4-2 522 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 349 bp overlap
ChIP DE DE-GATA6-2 491 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 156 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCFF667EJQ 431 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 86 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 401 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 261 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MED1 3 datasets
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 389 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 248 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCFF681QPL 645 bp overlap
MYB 4 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 259 bp overlap
ChIP DU528 GSE94000.MYB.DU528 418 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 430 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 190 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 308 bp overlap
ChIP hESC GSE18292.NANOG.hESC 262 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NFIC 3 datasets
ChIP GM12878 ENCFF259FWL 591 bp overlap
ChIP GM12878 ENCFF259FWL 371 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 456 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 378 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 117 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 210 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 132 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 77 bp overlap
RUNX1 5 datasets
ChIP 697 GSE138031.RUNX1.697 145 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 362 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 312 bp overlap
ChIP Jurkat GSE29180.RUNX1.Jurkat 294 bp overlap
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 245 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 282 bp overlap
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 663 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 351 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 250 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 272 bp overlap
SMARCA4 7 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 318 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 466 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 266 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 278 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 376 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 424 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 273 bp overlap
SMARCC1 1 dataset
ChIP BT-16_Dox GSE71504.SMARCC1.BT-16_Dox 203 bp overlap
SOX2 6 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 320 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 397 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 294 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 242 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 425 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 534 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 232 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 118 bp overlap
TAL1 2 datasets
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 377 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 276 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 148 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 205 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 246 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 135 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 251 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 164 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap