chr6 : 57,822,939 – 57,823,356

417 bp 85 TFs 0 linked genes

This 417 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

85 transcription factors

AR 1 dataset

ChIP WTC11 ENCFF267GQJ 277 bp overlap

ATF3 1 dataset

ChIP K562 ENCFF965VXT 177 bp overlap

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BARX1 1 dataset

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BARX2 2 datasets

Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap

BSX 1 dataset

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CDX2 1 dataset

Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCFF432ZEW 305 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 174 bp overlap

DLX1 1 dataset

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

EMX1 1 dataset

ChIP WTC11 ENCFF692RZJ 353 bp overlap

EP300 3 datasets

ChIP osteoblast ENCSR000AUD.EP300.osteoblast 261 bp overlap

ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 226 bp overlap

ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.EP300.pulmonary-artery_endothelial-cell_siPFKFB3 207 bp overlap

ERG 1 dataset

ChIP WTC11 ENCFF011YUL 190 bp overlap

ESRRB 1 dataset

Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap

ETV2::HOXB13 1 dataset

Motif ES_0h ES_0h-ETV2HOXB13_MA1943.2 13 bp overlap

ETV6 2 datasets

ChIP WTC11 ENCFF812SCD 321 bp overlap

ChIP WTC11 ENCFF812SCD 332 bp overlap

EZH2 1 dataset

ChIP GM23338 ENCFF613YON 180 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 326 bp overlap

Esrrg 1 dataset

Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap

FOXA1 1 dataset

Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap

FOXB1 1 dataset

Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap

FOXD2 1 dataset

Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap

FOXF2 1 dataset

Motif ES_0h ES_0h-FOXF2_MA0030.2 9 bp overlap

FOXG1 1 dataset

Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap

FOXH1 1 dataset

Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap

FOXK1 1 dataset

Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap

FOXO4 1 dataset

Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap

FOXP2 1 dataset

Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap

Foxf1 1 dataset

Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap

Foxj3 1 dataset

Motif ES_0h ES_0h-Foxj3_MA0851.2 9 bp overlap

Foxo1 1 dataset

Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap

Foxq1 1 dataset

Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap

GBX2 1 dataset

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

GTF3C2 1 dataset

ChIP K-562 ENCSR000DOD.GTF3C2.K-562 101 bp overlap

HDAC2 1 dataset

ChIP H1 ENCFF939VKA 237 bp overlap

HESX1 1 dataset

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HMGXB4 1 dataset

ChIP WTC11 ENCFF962POR 412 bp overlap

HOXA7 1 dataset

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

Hmx1 1 dataset

Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap

Hmx3 1 dataset

Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap

IRF2 1 dataset

Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap

IRF7 2 datasets

Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap

LBX2 1 dataset

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

MSX1 1 dataset

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NFATC4 1 dataset

ChIP WTC11 ENCFF744MZI 268 bp overlap

Nobox 1 dataset

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

OSR1 1 dataset

Motif ES_0h ES_0h-OSR1_MA1542.2 8 bp overlap

OSR2 1 dataset

Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap

POLR2H 1 dataset

ChIP K562 ENCFF377NHG 417 bp overlap

POLR3A 4 datasets

ChIP HeLa-S3 ENCFF777TAS 320 bp overlap

ChIP HeLa-S3 ENCFF777TAS 355 bp overlap

ChIP K562 ENCFF452GCM 204 bp overlap

ChIP K562 ENCFF452GCM 268 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

PRRX2 1 dataset

ChIP WTC11 ENCFF107JGJ 243 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAX 1 dataset

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

RNF2 1 dataset

ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap

RXRA::VDR 1 dataset

Motif ES_0h ES_0h-RXRAVDR_MA0074.1 15 bp overlap

SATB1 1 dataset

Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap

SIX2 1 dataset

Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap

SOX18 1 dataset

Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap

SRY 1 dataset

Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap

STAT1::STAT2 1 dataset

Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap

Stat6 1 dataset

Motif ES_0h ES_0h-Stat6_MA0520.2 10 bp overlap

TBP 13 datasets

ChIP H1 ENCFF859IIO 176 bp overlap

ChIP K-562 GSE55306.TBP.K-562 166 bp overlap

ChIP K-562 ENCSR000EHA.TBP.K-562 176 bp overlap

ChIP K562 ENCFF901UYM 137 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 198 bp overlap

ChIP hESC GSE122298.TBP.hESC 173 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 100 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 174 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 92 bp overlap

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 211 bp overlap

ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 203 bp overlap

ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 190 bp overlap

ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 205 bp overlap

ZNF354A 1 dataset

Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap

ZNF416 1 dataset

ChIP WTC11 ENCFF407TAZ 214 bp overlap

ZNF425 1 dataset

ChIP WTC11 ENCFF359IXT 255 bp overlap

ZNF524 1 dataset

Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap

ZNF532 1 dataset

ChIP WTC11 ENCFF373VBX 252 bp overlap

ZNF547 1 dataset

Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap

ZNF671 1 dataset

ChIP WTC11 ENCFF053HBV 251 bp overlap

ZNF766 1 dataset

Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap

ZNF85 1 dataset

Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap