chr6 : 8,635,075 – 8,635,701

626 bp 84 TFs 0 linked genes

This 626 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

84 transcription factors

ARNT2 1 dataset

Motif DE_60h DE_60h-ARNT2_MA1464.2 8 bp overlap

ARNT::HIF1A 1 dataset

Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap

ATF4 1 dataset

Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap

Arnt 1 dataset

Motif DE_60h DE_60h-Arnt_MA0004.1 6 bp overlap

Arntl 1 dataset

Motif DE_60h DE_60h-Arntl_MA0603.2 8 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BHLHE40 1 dataset

Motif DE_60h DE_60h-BHLHE40_MA0464.3 8 bp overlap

BHLHE41 1 dataset

Motif DE_60h DE_60h-BHLHE41_MA0636.1 10 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CEBPG 1 dataset

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 338 bp overlap

DUXA 1 dataset

Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

Dux 1 dataset

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EBF3 1 dataset

Motif DE_60h DE_60h-EBF3_MA1637.2 9 bp overlap

EN2 1 dataset

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 394 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

Ebf2 1 dataset

Motif DE_60h DE_60h-Ebf2_MA1604.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 466 bp overlap

ChIP DE DE-FOXA2-2 424 bp overlap

GATA1::TAL1 1 dataset

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 553 bp overlap

ChIP DE DE-GATA4-2 571 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 533 bp overlap

ChIP DE DE-GATA6-2 544 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 475 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 593 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 429 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 626 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 512 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 477 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 422 bp overlap

GBX1 1 dataset

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

GLIS1 1 dataset

Motif DE_60h DE_60h-GLIS1_MA0735.2 15 bp overlap

GLIS2 1 dataset

Motif DE_60h DE_60h-GLIS2_MA0736.1 14 bp overlap

GLIS3 2 datasets

Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

INSM1 1 dataset

Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap

JUN 2 datasets

Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 290 bp overlap

LBX1 1 dataset

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

MAX 1 dataset

Motif DE_60h DE_60h-MAX_MA0058.4 6 bp overlap

MGA::EVX1 1 dataset

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

MITF 5 datasets

ChIP 501-mel GSE137522.MITF.501-mel 304 bp overlap

ChIP 501-mel GSE61965.MITF.501-mel 204 bp overlap

ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 257 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 295 bp overlap

Motif DE_60h DE_60h-MITF_MA0620.4 10 bp overlap

MLX 1 dataset

Motif DE_60h DE_60h-MLX_MA0663.1 10 bp overlap

MLXIPL 1 dataset

Motif DE_60h DE_60h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif DE_60h DE_60h-MNT_MA0825.2 6 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MZF1 1 dataset

Motif DE_60h DE_60h-MZF1_MA0056.3 8 bp overlap

Mlxip 1 dataset

Motif DE_60h DE_60h-Mlxip_MA0622.2 6 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NFKB1 1 dataset

Motif DE_60h DE_60h-NFKB1_MA0105.4 13 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PRRX2 1 dataset

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

RARA 1 dataset

Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

REST 1 dataset

ChIP liver ENCSR893QWP.REST.liver 140 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RORA 1 dataset

Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 462 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 346 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 356 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 493 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 450 bp overlap

SP5 1 dataset

Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap

SREBF1 1 dataset

Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap

SREBF2 1 dataset

Motif DE_60h DE_60h-SREBF2_MA0828.3 10 bp overlap

TFE3 1 dataset

Motif DE_60h DE_60h-TFE3_MA0831.3 10 bp overlap

TFEB 1 dataset

Motif DE_60h DE_60h-TFEB_MA0692.2 8 bp overlap

TFEC 1 dataset

Motif DE_60h DE_60h-TFEC_MA0871.3 8 bp overlap

USF2 1 dataset

Motif DE_60h DE_60h-USF2_MA0526.5 10 bp overlap

ZNF24 1 dataset

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

ZNF274 1 dataset

Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap

ZNF528 1 dataset

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

ZNF740 1 dataset

Motif DE_60h DE_60h-ZNF740_MA0753.3 10 bp overlap

ZSCAN4 1 dataset

Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap