chr5 : 160,310,967 – 160,311,254

287 bp 56 TFs 1 linked gene

This 287 bp open chromatin element is linked to CCNJL and is bound by 56 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
CCNJL		1.3 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

56 transcription factors

ATF7 1 dataset

ChIP MCF-7 ENCFF578WKB 151 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 53 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

CBX8 1 dataset

ChIP K-562 ENCSR000ATW.CBX8.K-562 287 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 109 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 228 bp overlap

DPF2 1 dataset

ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 139 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 287 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 113 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 287 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

EZH2 5 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 266 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 218 bp overlap

ChIP astrocyte ENCFF365JTP 230 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 250 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 170 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 209 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 287 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 91 bp overlap

KMT2A 1 dataset

ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 212 bp overlap

MAX 2 datasets

ChIP H1 ENCFF914VQY 282 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 261 bp overlap

MAZ 3 datasets

ChIP HEK293 ENCFF994GSG 287 bp overlap

ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 258 bp overlap

ChIP HEK293 GSE76494.MAZ.HEK293 190 bp overlap

MECOM 1 dataset

ChIP SKH1 GSE102697.MECOM.SKH1 181 bp overlap

MTF2 1 dataset

ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 287 bp overlap

MYCN 1 dataset

ChIP Kelly_res GSE115249.MYCN.Kelly_res 129 bp overlap

MYOD1 4 datasets

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 178 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 258 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 224 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 236 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 276 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 248 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 55 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 275 bp overlap

RAD21 1 dataset

ChIP H1 ENCFF698EWO 180 bp overlap

RBBP4 1 dataset

ChIP RH5 GSE155861.RBBP4.RH5 226 bp overlap

RNF2 1 dataset

ChIP K-562 ENCSR820GND.RNF2.K-562 287 bp overlap

SIN3A 1 dataset

ChIP WA01 ENCSR000EBO.SIN3A.WA01 184 bp overlap

SIX2 4 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 188 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 189 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 157 bp overlap

SIX4 1 dataset

ChIP WTC11 ENCFF891HYW 270 bp overlap

SMARCA4 2 datasets

ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 271 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap

SMC3 1 dataset

ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 203 bp overlap

SNAI2 1 dataset

ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 209 bp overlap

SP1 1 dataset

ChIP HEK293 GSE76494.SP1.HEK293 169 bp overlap

SPI1 1 dataset

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 145 bp overlap

TBP 1 dataset

ChIP WA01 ENCSR000ECB.TBP.WA01 125 bp overlap

TCF3 1 dataset

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 181 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 287 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

WT1 1 dataset

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 186 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 119 bp overlap

ZBTB17 2 datasets

ChIP HEK293 ENCFF865LIO 266 bp overlap

ChIP HEK293 ENCFF865LIO 287 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 202 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 287 bp overlap

ZNF184 1 dataset

ChIP WTC11 ENCFF352POG 287 bp overlap

ZNF528 1 dataset

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

ZNF770 3 datasets

ChIP HEK293 ENCFF468FCG 193 bp overlap

ChIP HEK293 GSE76494.ZNF770.HEK293 151 bp overlap

ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 123 bp overlap

ZNF93 1 dataset

Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap