chr5 : 154,582,314 154,582,666
352 bp 58 TFs 0 linked genes
This 352 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:154,577,314 – 154,587,666
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AFF4 3 datasets
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 68 bp overlap
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 78 bp overlap
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 81 bp overlap
BRD4 12 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 192 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 253 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 310 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 101 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 55 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 87 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 54 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 62 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 64 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 134 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 65 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 81 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 158 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
ELF1 1 dataset
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 68 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 220 bp overlap
EP300 2 datasets
ChIP MCF-7 GSE128445.EP300.MCF-7 208 bp overlap
ChIP MCF-7_TamR GSE128445.EP300.MCF-7_TamR 108 bp overlap
ESR1 28 datasets
ChIP MCF-7 GSE128445.ESR1.MCF-7 208 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 118 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 98 bp overlap
ChIP MCF-7_IKK7 GSE67295.ESR1.MCF-7_IKK7 73 bp overlap
ChIP MCF-7_IL1b-ICI GSE67295.ESR1.MCF-7_IL1b-ICI 74 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.ESR1.MCF-7_IL1b_45m 71 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 157 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 202 bp overlap
ChIP MCF-7_SHCTR_E2 GSE60270.ESR1.MCF-7_SHCTR_E2 61 bp overlap
ChIP MCF-7_TAMR_TAM ERP000380.ESR1.MCF-7_TAMR_TAM 120 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.ESR1.MCF-7_TNFa_45m 74 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 116 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 103 bp overlap
ChIP MCF-7_oeCtrl GSE128445.ESR1.MCF-7_oeCtrl 188 bp overlap
ChIP MCF-7_oeJUN GSE128445.ESR1.MCF-7_oeJUN 155 bp overlap
ChIP MCF-7_shCtrl GSE128445.ESR1.MCF-7_shCtrl 134 bp overlap
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 78 bp overlap
ChIP MCF-7_shGATA3 GSE128445.ESR1.MCF-7_shGATA3 79 bp overlap
ChIP T-47D GSE68355.ESR1.T-47D 62 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 97 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 64 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 123 bp overlap
ChIP breast_tumor_Male_13 GSE104399.ESR1.breast_tumor_Male_13 103 bp overlap
ChIP breast_tumor_Male_16 GSE104399.ESR1.breast_tumor_Male_16 112 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 50 bp overlap
ChIP breast_tumor_Male_22 GSE104399.ESR1.breast_tumor_Male_22 65 bp overlap
ChIP breast_tumor_Male_6 GSE104399.ESR1.breast_tumor_Male_6 73 bp overlap
ChIP breast_tumor_Male_7 GSE104399.ESR1.breast_tumor_Male_7 81 bp overlap
FOSL1 1 dataset
ChIP HCT116 ENCFF540ZXN 96 bp overlap
FOSL2 1 dataset
ChIP A-549 ENCSR000BQO.FOSL2.A-549 114 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 77 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 300 bp overlap
ChIP DE DE-FOXA2-2 319 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 82 bp overlap
GATA2 1 dataset
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 338 bp overlap
ChIP DE DE-GATA4-2 352 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 335 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 311 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 340 bp overlap
ChIP DE DE-GATA6-2 352 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 352 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 315 bp overlap
ChIP foregut GSE117136.GATA6.foregut 334 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 333 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 351 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 315 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Gata3 1 dataset
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
HIF1A 1 dataset
Motif DE_36h DE_36h-HIF1A_MA1106.2 6 bp overlap
ISL2 2 datasets
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 229 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 185 bp overlap
MAFK 1 dataset
ChIP HeLa-S3 ENCFF304XGR 86 bp overlap
MAX 3 datasets
ChIP HeLa-S3 ENCFF019SXC 212 bp overlap
ChIP HeLa-S3 ENCFF398RFF 71 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 112 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA1639.2 9 bp overlap
MNT 2 datasets
ChIP MCF-7 ENCFF144ZFZ 87 bp overlap
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 63 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 124 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 159 bp overlap
Nkx3-1 1 dataset
Motif DE_36h DE_36h-Nkx3-1_MA0124.3 7 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 219 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 223 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 209 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 107 bp overlap
RCOR1 1 dataset
ChIP HeLa GSE45441.RCOR1.HeLa 198 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 149 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 165 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 308 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 112 bp overlap
ChIP HeLa-S3 ENCSR000EZC.SMARCA4.HeLa-S3 54 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 232 bp overlap
STAT3 1 dataset
ChIP HeLa-S3 ENCFF655DGU 177 bp overlap
TCF7L2 4 datasets
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 76 bp overlap
ChIP HeLa-S3 ENCFF084KRL 60 bp overlap
ChIP HeLa-S3 ENCFF673QAB 113 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 76 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 352 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 51 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 115 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 64 bp overlap
TRPS1 1 dataset
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 86 bp overlap
ZBTB40 8 datasets
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 107 bp overlap
ChIP Hep-G2 ENCSR525YFS.ZBTB40.Hep-G2 69 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 236 bp overlap
ChIP K-562 ENCSR158RYZ.ZBTB40.K-562 106 bp overlap
ChIP K562 ENCFF337GJB 52 bp overlap
ChIP K562 ENCFF521DSV 183 bp overlap
ChIP MCF-7 ENCFF044DWL 150 bp overlap
ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 216 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 291 bp overlap
ZKSCAN1 1 dataset
ChIP HeLa-S3 ENCFF104OCU 89 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 162 bp overlap
ZNF667 1 dataset
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap