chr5 : 82,272,816 – 82,273,849
1,033 bp 72 TFs 2 linked genes
This 1.0 kb open chromatin element is linked to RPS23 and ENSG00000293465 and is bound by 72 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPS23 4.5 kb Proximal Proximity
ENSG00000293465 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:82,267,816 – 82,278,849
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AGO1 9 datasets
ChIP HepG2 ENCFF277EOU 705 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 274 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 266 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 488 bp overlap
ChIP K562 ENCFF025NLP 250 bp overlap
ChIP K562 ENCFF025NLP 661 bp overlap
ChIP K562 ENCFF025NLP 62 bp overlap
ChIP K562 ENCFF741BCI 220 bp overlap
ChIP K562 ENCFF741BCI 658 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 365 bp overlap
ChIP HepG2 ENCFF773YDL 362 bp overlap
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 302 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 221 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 347 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 143 bp overlap
BCL11A 1 dataset
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
BCL3 3 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 151 bp overlap
ChIP A549 ENCFF214WKT 535 bp overlap
ChIP GM12878 ENCFF854PAY 351 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 142 bp overlap
BCLAF1 1 dataset
ChIP GM12878 ENCFF306JRM 431 bp overlap
BRD4 7 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 619 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 331 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 825 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 99 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 92 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 155 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 66 bp overlap
Bach1::Mafk 2 datasets
Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap
Motif ES_0h ES_0h-Bach1Mafk_MA0591.2 12 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCFF056JUS 271 bp overlap
CEBPB 5 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 116 bp overlap
ChIP GM12878 ENCFF942VJF 491 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 146 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP K562 ENCFF584CTB 525 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
Cebpa 14 datasets
ChIP BLaER1 ENCFF031ISE 659 bp overlap
ChIP BLaER1 ENCFF093OYK 479 bp overlap
ChIP BLaER1 ENCFF140EYR 437 bp overlap
ChIP BLaER1 ENCFF234NTO 441 bp overlap
ChIP BLaER1 ENCFF274GAT 759 bp overlap
ChIP BLaER1 ENCFF346MCV 300 bp overlap
ChIP BLaER1 ENCFF364PUR 577 bp overlap
ChIP BLaER1 ENCFF399AYC 461 bp overlap
ChIP BLaER1 ENCFF460KDD 411 bp overlap
ChIP BLaER1 ENCFF508JZF 441 bp overlap
ChIP BLaER1 ENCFF798NMV 264 bp overlap
ChIP BLaER1 ENCFF844FIP 370 bp overlap
ChIP BLaER1 ENCFF858JKM 457 bp overlap
ChIP BLaER1 ENCFF896HSY 527 bp overlap
DDX20 1 dataset
ChIP K-562 ENCSR446LAV.DDX20.K-562 70 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 97 bp overlap
ELF1 3 datasets
ChIP GM12878 ENCFF432UGA 365 bp overlap
ChIP GM12878 ENCFF692SMY 137 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 164 bp overlap
ESR1 4 datasets
ChIP MCF-7_E2_SRC-3 GSE119702.ESR1.MCF-7_E2_SRC-3 106 bp overlap
ChIP MCF-7_SRC3 GSE119702.ESR1.MCF-7_SRC3 106 bp overlap
ChIP MCF-7_shFbxo_E2_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_E2_SRC-3 116 bp overlap
ChIP MCF-7_shFbxo_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_SRC-3 116 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 55 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
HLF 2 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
HNRNPK 1 dataset
ChIP primary-keratinocyte GSE122327.HNRNPK.primary-keratinocyte 86 bp overlap
JUN 2 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 222 bp overlap
JUND 3 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 172 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 218 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 88 bp overlap
MPHOSPH8 1 dataset
ChIP H9 GSE95374.MPHOSPH8.H9 102 bp overlap
MTA3 3 datasets
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 143 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 182 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 58 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 77 bp overlap
Mafg 2 datasets
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 116 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 137 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 99 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 101 bp overlap
NFATC1 3 datasets
ChIP GM12878 ENCFF023CAZ 134 bp overlap
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 579 bp overlap
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 117 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 151 bp overlap
NOTCH1 1 dataset
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.NOTCH1.pulmonary-artery_endothelial-cell_siPFKFB3 131 bp overlap
PAF1 1 dataset
ChIP HepG2 ENCFF949UAN 199 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 125 bp overlap
PBX3 3 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
PML 2 datasets
ChIP GM12878 ENCFF160JQZ 411 bp overlap
ChIP GM12878 ENCSR000BQM.PML.GM12878 98 bp overlap
POLR2A 25 datasets
ChIP GM12878 ENCFF263VRI 481 bp overlap
ChIP GM12891 ENCFF379FCI 455 bp overlap
ChIP GM12891 ENCFF379FCI 501 bp overlap
ChIP GM12892 ENCFF506PGQ 477 bp overlap
ChIP GM18526 ENCFF599EPS 431 bp overlap
ChIP GM18526 ENCFF599EPS 431 bp overlap
ChIP GM18951 ENCFF079KKO 497 bp overlap
ChIP GM18951 ENCFF079KKO 480 bp overlap
ChIP H1 ENCFF566JSR 278 bp overlap
ChIP H1 ENCFF833NJP 240 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 287 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 545 bp overlap
ChIP HeLa-S3 ENCFF773DNG 186 bp overlap
ChIP HeLa-S3 ENCFF773DNG 541 bp overlap
ChIP IMR-90 ENCFF672YWV 348 bp overlap
ChIP K562 ENCFF214YGX 657 bp overlap
ChIP K562 ENCFF214YGX 195 bp overlap
ChIP K562 ENCFF215CWW 533 bp overlap
ChIP PFSK-1 ENCFF576NIT 557 bp overlap
ChIP PFSK-1 ENCFF576NIT 557 bp overlap
ChIP SK-N-MC ENCFF088IVG 491 bp overlap
ChIP SK-N-MC ENCFF088IVG 491 bp overlap
ChIP erythroblast ENCFF498VMR 723 bp overlap
ChIP spleen ENCFF446ZGT 282 bp overlap
ChIP spleen ENCFF706IUS 275 bp overlap
POLR2G 6 datasets
ChIP HepG2 ENCFF241AEG 447 bp overlap
ChIP HepG2 ENCFF241AEG 353 bp overlap
ChIP HepG2 ENCFF508UTS 300 bp overlap
ChIP HepG2 ENCFF508UTS 556 bp overlap
ChIP K562 ENCFF047BLG 402 bp overlap
ChIP K562 ENCFF648YPL 378 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 191 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 99 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 114 bp overlap
RBFOX2 6 datasets
ChIP HepG2 ENCFF554DMZ 681 bp overlap
ChIP HepG2 ENCFF554DMZ 646 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 304 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 247 bp overlap
ChIP K562 ENCFF196WTG 337 bp overlap
ChIP K562 ENCFF967GRF 357 bp overlap
RBM22 2 datasets
ChIP K-562 ENCSR848AOP.RBM22.K-562 200 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 210 bp overlap
RELA 1 dataset
ChIP U2OS_10Gy_2h_recovery GSE109996.RELA.U2OS_10Gy_2h_recovery 95 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 109 bp overlap
SPI1 6 datasets
ChIP GM12878 ENCFF134LCP 147 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 297 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 315 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 295 bp overlap
ChIP primary-B-cell_donorC GSE128834.SPI1.primary-B-cell_donorC 167 bp overlap
SPIB 2 datasets
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 364 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 315 bp overlap
SRSF4 2 datasets
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 56 bp overlap
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 56 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 106 bp overlap
SUPT5H 11 datasets
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 237 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 188 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 181 bp overlap
ChIP K562 ENCFF902PAW 262 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 62 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 188 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 152 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 103 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 84 bp overlap
ChIP U2OS_siMYC_High GSE115365.SUPT5H.U2OS_siMYC_High 108 bp overlap
ChIP U2OS_siMYC_ON GSE115365.SUPT5H.U2OS_siMYC_ON 93 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 272 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 3 datasets
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 113 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 146 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 260 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF677 1 dataset
ChIP HEK293 ENCFF220HCQ 277 bp overlap
ZNF700 1 dataset
ChIP K-562 ENCSR959BQO.ZNF700.K-562 64 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 82 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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