chr5 : 19,859,102 19,859,629
527 bp 49 TFs 0 linked genes
This 527 bp open chromatin element has no linked target genes and is bound by 49 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:19,854,102 – 19,864,629
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
BACH2 1 dataset
Motif ES_0h ES_0h-BACH2_MA1101.3 11 bp overlap
EPAS1 1 dataset
Motif ES_0h ES_0h-EPAS1_MA2325.1 9 bp overlap
ESRRB 1 dataset
Motif ES_0h ES_0h-ESRRB_MA0141.4 10 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
GRHL2 2 datasets
ChIP OVCA429 GSE71018.GRHL2.OVCA429 193 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 167 bp overlap
HES7 1 dataset
Motif ES_0h ES_0h-HES7_MA0822.1 12 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HIF1A 1 dataset
Motif ES_0h ES_0h-HIF1A_MA1106.2 6 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
Lef1 1 dataset
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 291 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 393 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 243 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 165 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 274 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 244 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
PHOX2B 1 dataset
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POU5F1 2 datasets
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 328 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RORA 1 dataset
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
SIX1 1 dataset
Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 285 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 280 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 219 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 320 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 157 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SREBF1 1 dataset
Motif ES_0h ES_0h-SREBF1_MA0595.1 10 bp overlap
STAT3 3 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 154 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 259 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 195 bp overlap
Six4 1 dataset
Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap
TCF7 1 dataset
Motif ES_0h ES_0h-TCF7_MA0769.3 7 bp overlap
TEAD1 2 datasets
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 325 bp overlap
TEAD3 1 dataset
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 5 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 469 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 236 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 284 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 290 bp overlap
TFCP2 1 dataset
Motif ES_0h ES_0h-TFCP2_MA1968.2 9 bp overlap
ZKSCAN5 2 datasets
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF143 1 dataset
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF410 1 dataset
Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap
ZNF684 2 datasets
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap