chr5 : 10,904,901 – 10,905,427

526 bp 68 TFs 0 linked genes

This 526 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

68 transcription factors

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 526 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 393 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 183 bp overlap

BCL11A 1 dataset

ChIP MCF-10A ERP003925.BCL11A.MCF-10A 70 bp overlap

BRD2 1 dataset

ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 204 bp overlap

BRD4 1 dataset

ChIP K-562_iBET-BD1 GSE138084.BRD4.K-562_iBET-BD1 234 bp overlap

CEBPA 1 dataset

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

CEBPD 1 dataset

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCFF432ZEW 235 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 191 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 144 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 231 bp overlap

EOMES 1 dataset

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

ESR1 1 dataset

ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 183 bp overlap

FOXF2 1 dataset

Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap

FOXG1 1 dataset

Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap

FOXK1 1 dataset

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxj3 1 dataset

Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 388 bp overlap

ChIP DE DE-GATA4-2 280 bp overlap

GATA6 2 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 330 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 526 bp overlap

HAND2 2 datasets

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

KLF4 1 dataset

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

MAX 2 datasets

ChIP H1 ENCFF914VQY 343 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 277 bp overlap

MGA 1 dataset

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

MXI1 3 datasets

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap

NANOG 8 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 307 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 261 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 524 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 259 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 332 bp overlap

ChIP hESC GSE20650.NANOG.hESC 165 bp overlap

ChIP hESC GSE18292.NANOG.hESC 143 bp overlap

ChIP hESC GSE18292.NANOG.hESC 106 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU5F1 9 datasets

ChIP BG03 GSE21614.POU5F1.BG03 170 bp overlap

ChIP GM23338 ENCFF333SNB 248 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 435 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 183 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 472 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 214 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 243 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 335 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 235 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RELA 1 dataset

ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 175 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 383 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 345 bp overlap

SMARCB1 2 datasets

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 52 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 175 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 402 bp overlap

SOX2 3 datasets

ChIP H9 GSE46837.SOX2.H9 199 bp overlap

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 290 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 267 bp overlap

SREBF2 1 dataset

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 267 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX18 1 dataset

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 425 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 338 bp overlap

TP73 2 datasets

Motif DE_12h DE_12h-TP73_MA0861.2 16 bp overlap

Motif ES_0h ES_0h-TP73_MA0861.2 16 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 186 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 370 bp overlap

ZFP42 1 dataset

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 198 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 250 bp overlap

ZNF558 3 datasets

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap

ZNF684 1 dataset

Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap

ZNF750 1 dataset

ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 257 bp overlap

ZNF768 2 datasets

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap