Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

54 transcription factors

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

BCL6 1 dataset

Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 380 bp overlap

BRD4 8 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 131 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 98 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 471 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 319 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 223 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 144 bp overlap

ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 124 bp overlap

ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 261 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 234 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 90 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 87 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 137 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 138 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF3 3 datasets

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

ChIP PDAC GSE64557.ELF3.PDAC 278 bp overlap

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 471 bp overlap

ETV7 1 dataset

Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap

Foxj3 1 dataset

Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap

GATA1::TAL1 1 dataset

Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 1 dataset

ChIP SK-N-SH ENCFF764OZD 171 bp overlap

GATA3 2 datasets

ChIP Kelly GSE94822.GATA3.Kelly 101 bp overlap

ChIP Kelly GSE65664.GATA3.Kelly 87 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 270 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 341 bp overlap

HAND2 3 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 179 bp overlap

ChIP Kelly GSE94822.HAND2.Kelly 102 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 182 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 174 bp overlap

JUN 1 dataset

Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap

MEF2D 2 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 98 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 73 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

MYC 2 datasets

ChIP Kelly GSE138295.MYC.Kelly 191 bp overlap

ChIP NB69 GSE138295.MYC.NB69 277 bp overlap

MYCN 12 datasets

ChIP BE2C GSE80151.MYCN.BE2C 255 bp overlap

ChIP CHP-134 GSE129588.MYCN.CHP-134 158 bp overlap

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 471 bp overlap

ChIP IMR-5_CD532 GSE78957.MYCN.IMR-5_CD532 123 bp overlap

ChIP IMR-5_DMSO GSE78957.MYCN.IMR-5_DMSO 71 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 432 bp overlap

ChIP Kelly GSE80151.MYCN.Kelly 146 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 433 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 445 bp overlap

ChIP NGP GSE80151.MYCN.NGP 318 bp overlap

ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 255 bp overlap

ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 123 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 165 bp overlap

NKX2-1 1 dataset

ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 160 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap

Nr2e3 1 dataset

Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 79 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 163 bp overlap

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 107 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 164 bp overlap

POLR2A 1 dataset

ChIP stomach ENCFF820WZN 278 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 59 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 150 bp overlap

SMARCA4 3 datasets

ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 58 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 190 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 80 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 198 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 269 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat6 1 dataset

Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap

TBX2 2 datasets

ChIP Kelly GSE94822.TBX2.Kelly 107 bp overlap

ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 150 bp overlap

TEAD4 2 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 117 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 117 bp overlap

TFEB 1 dataset

Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap

TFEC 1 dataset

Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap

TSHZ2 1 dataset

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 117 bp overlap

USF1 1 dataset

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF341 1 dataset

ChIP HEK293 GSE76494.ZNF341.HEK293 131 bp overlap

ZNF425 1 dataset

ChIP HEK293T GSE78099.ZNF425.HEK293T 134 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 199 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF770 1 dataset

ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 253 bp overlap

Zfx 1 dataset

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap

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