chr4 : 147,522,274 147,523,482
1,208 bp 84 TFs 4 linked genes
This 1.2 kb open chromatin element is linked to 4 target genes and is bound by 84 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
EDNRA 42.2 kb Distal Multiome
TMEM184C 94.3 kb Distal Multiome
PRMT9 161.1 kb Distal Multiome
ARHGAP10 209.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:147,517,274 – 147,528,482
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_48h DE_48h-ASCL1_MA1100.3 8 bp overlap
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
Ascl2 1 dataset
Motif DE_48h DE_48h-Ascl2_MA0816.1 10 bp overlap
BARX2 1 dataset
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 290 bp overlap
CREB1 4 datasets
Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap
Motif DE_48h DE_48h-CREB1_MA0018.5 8 bp overlap
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 203 bp overlap
DBP 1 dataset
Motif DE_48h DE_48h-DBP_MA0639.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
DUXA 2 datasets
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 249 bp overlap
ChIP hESC GSE26097.EOMES.hESC 238 bp overlap
FEZF2 1 dataset
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 456 bp overlap
ChIP DE DE-FOXA2-1 451 bp overlap
ChIP DE DE-FOXA2-2 338 bp overlap
ChIP DE DE-FOXA2-2 462 bp overlap
FOXD2 1 dataset
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Foxq1 1 dataset
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GABPA 3 datasets
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap
GATA1 1 dataset
Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap
GATA1::TAL1 4 datasets
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 1115 bp overlap
ChIP DE DE-GATA4-2 1178 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 398 bp overlap
ChIP foregut GSE117136.GATA4.foregut 417 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 280 bp overlap
GATA5 4 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 470 bp overlap
ChIP DE DE-GATA6-1 472 bp overlap
ChIP DE DE-GATA6-2 1177 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1022 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1126 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 501 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 495 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1204 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1081 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 997 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 448 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 503 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Gfi1B 2 datasets
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
HLF 1 dataset
Motif DE_48h DE_48h-HLF_MA0043.4 9 bp overlap
HMBOX1 2 datasets
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 155 bp overlap
Hand1::Tcf3 2 datasets
Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_48h DE_48h-Hand1Tcf3_MA0092.2 9 bp overlap
INSM1 3 datasets
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
Motif DE_48h DE_48h-INSM1_MA0155.1 12 bp overlap
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
ISL2 1 dataset
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 375 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 236 bp overlap
KLF17 4 datasets
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap
Motif DE_60h DE_60h-KLF17_MA1514.2 14 bp overlap
Motif DE_72h DE_72h-KLF17_MA1514.2 14 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 251 bp overlap
Lhx3 1 dataset
Motif DE_48h DE_48h-Lhx3_MA0135.2 12 bp overlap
MAFF 3 datasets
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MITF 5 datasets
ChIP 501-mel GSE137522.MITF.501-mel 286 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 258 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 303 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 269 bp overlap
ChIP K562 ENCFF731XJJ 234 bp overlap
MYOG 1 dataset
Motif DE_48h DE_48h-MYOG_MA0500.3 8 bp overlap
Mafb 3 datasets
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NFIL3 1 dataset
Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap
NHLH1 1 dataset
Motif DE_48h DE_48h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_48h DE_48h-NHLH2_MA1529.2 16 bp overlap
NRL 3 datasets
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Olig2 1 dataset
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
PHOX2A 1 dataset
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 4 datasets
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
Motif DE_72h DE_72h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
POU4F1 1 dataset
Motif DE_48h DE_48h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_48h DE_48h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_48h DE_48h-POU4F3_MA0791.2 12 bp overlap
POU5F1B 4 datasets
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_72h DE_72h-POU5F1B_MA0792.1 9 bp overlap
PROP1 1 dataset
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
RAD51 3 datasets
ChIP Hep-G2 ENCSR081WLS.RAD51.Hep-G2 210 bp overlap
ChIP HepG2 ENCFF188FEZ 250 bp overlap
ChIP K562 ENCFF133ELP 281 bp overlap
RFX1 2 datasets
Motif DE_36h DE_36h-RFX1_MA0509.3 16 bp overlap
Motif DE_48h DE_48h-RFX1_MA0509.3 16 bp overlap
RFX2 2 datasets
Motif DE_36h DE_36h-RFX2_MA0600.3 14 bp overlap
Motif DE_48h DE_48h-RFX2_MA0600.3 14 bp overlap
RFX5 2 datasets
Motif DE_36h DE_36h-RFX5_MA0510.3 14 bp overlap
Motif DE_48h DE_48h-RFX5_MA0510.3 14 bp overlap
RUNX3 2 datasets
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
SMAD2 2 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1151 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 1112 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 276 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 323 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1063 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 300 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1208 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1157 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 911 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 186 bp overlap
TCF7L2 1 dataset
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 271 bp overlap
TOE1 1 dataset
ChIP MCF-7 ENCFF544WQF 278 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Thap11 1 dataset
Motif DE_48h DE_48h-Thap11_MA1573.2 14 bp overlap
Twist2 1 dataset
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
USF1 2 datasets
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 100 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 169 bp overlap
USF2 3 datasets
ChIP GM12878 GSE97661.USF2.GM12878 145 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 175 bp overlap
ChIP K562 ENCFF306QPU 354 bp overlap
ZBTB6 1 dataset
Motif DE_48h DE_48h-ZBTB6_MA1581.2 9 bp overlap
ZNF175 3 datasets
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap
Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap
ZNF213 1 dataset
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
ZNF354A 1 dataset
Motif DE_48h DE_48h-ZNF354A_MA1978.2 20 bp overlap
ZNF382 1 dataset
Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap
ZNF384 1 dataset
Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap
ZNF460 2 datasets
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
ZNF558 3 datasets
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
ZNF93 1 dataset
Motif DE_48h DE_48h-ZNF93_MA1721.2 14 bp overlap
ZSCAN21 3 datasets
Motif DE_36h DE_36h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_48h DE_48h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_60h DE_60h-ZSCAN21_MA2336.1 7 bp overlap
ZSCAN4 3 datasets
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap