chr4 : 146,887,885 – 146,888,633
748 bp 55 TFs 0 linked genes
This 748 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:146,882,885 – 146,893,633
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast-cancer_ENOB-2852 GSE128018.AR.breast-cancer_ENOB-2852 202 bp overlap
ATF2 2 datasets
Motif DE_48h DE_48h-ATF2_MA1632.2 10 bp overlap
Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap
CREB1 2 datasets
Motif DE_48h DE_48h-CREB1_MA0018.5 8 bp overlap
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 79 bp overlap
Elf5 2 datasets
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FIGLA 2 datasets
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOSL2::JUN 2 datasets
Motif DE_48h DE_48h-FOSL2JUN_MA1131.2 10 bp overlap
Motif DE_60h DE_60h-FOSL2JUN_MA1131.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 518 bp overlap
ChIP DE DE-GATA4-2 573 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 367 bp overlap
ChIP DE DE-GATA6-2 549 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 319 bp overlap
GTF2B 1 dataset
ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 140 bp overlap
Gmeb1 2 datasets
Motif DE_48h DE_48h-Gmeb1_MA0615.2 6 bp overlap
Motif DE_60h DE_60h-Gmeb1_MA0615.2 6 bp overlap
IKZF2 4 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
JUN 3 datasets
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 130 bp overlap
JUND 2 datasets
Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
MZF1 1 dataset
Motif DE_48h DE_48h-MZF1_MA0056.3 8 bp overlap
NFKB1 1 dataset
Motif DE_48h DE_48h-NFKB1_MA0105.4 13 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_48h DE_48h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2C1 2 datasets
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
NR2F1 2 datasets
Motif DE_48h DE_48h-NR2F1_MA1538.1 15 bp overlap
Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap
NR2F6 2 datasets
Motif DE_48h DE_48h-NR2F6_MA1539.1 15 bp overlap
Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 2 datasets
Motif DE_48h DE_48h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_60h DE_60h-NR4A2RXRA_MA1147.2 13 bp overlap
Nr1H2 2 datasets
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
POU2F1 1 dataset
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap
POU3F3 1 dataset
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 176 bp overlap
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
POU5F1B 1 dataset
Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap
Prdm15 1 dataset
Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap
RARA 5 datasets
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0730.1 17 bp overlap
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
Motif DE_60h DE_60h-RARA_MA0730.1 17 bp overlap
REST 1 dataset
Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap
Rarb 3 datasets
Motif DE_48h DE_48h-Rarb_MA0857.1 16 bp overlap
Motif DE_48h DE_48h-Rarb_MA0858.1 17 bp overlap
Motif DE_60h DE_60h-Rarb_MA0858.1 17 bp overlap
SATB1 2 datasets
ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 76 bp overlap
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 142 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 444 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 248 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 151 bp overlap
SOX21 1 dataset
Motif DE_48h DE_48h-SOX21_MA0866.1 15 bp overlap
SPI1 1 dataset
ChIP DC_LPS GSE123347.SPI1.DC_LPS 105 bp overlap
Sox1 1 dataset
Motif DE_48h DE_48h-Sox1_MA0870.1 15 bp overlap
TFAP2A 2 datasets
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
THRB 2 datasets
Motif DE_48h DE_48h-THRB_MA1575.2 17 bp overlap
Motif DE_60h DE_60h-THRB_MA1575.2 17 bp overlap
Tbx6 2 datasets
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
ZEB1 2 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 170 bp overlap
ZNF16 3 datasets
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 157 bp overlap
ZNF652 1 dataset
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
ZNF675 1 dataset
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
ZNF701 2 datasets
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF75D 2 datasets
Motif DE_48h DE_48h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
Zfp335 2 datasets
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
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