chr4 : 94,995,727 94,996,001
274 bp 59 TFs 0 linked genes
This 274 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:94,990,727 – 95,001,001
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 13 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 238 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 156 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 205 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 145 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 99 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 154 bp overlap
ChIP VCaP GSE148358.AR.VCaP 163 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 179 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 189 bp overlap
ChIP prostate GSE56288.AR.prostate 185 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 88 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 208 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 274 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 274 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 237 bp overlap
ASH2L 3 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 163 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 150 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 128 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 144 bp overlap
BRD4 9 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 272 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 272 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 274 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 213 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 162 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 274 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 52 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 157 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 129 bp overlap
CTCF 2 datasets
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 274 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 232 bp overlap
EP300 1 dataset
ChIP gastroesophageal sphincter ENCFF211FPL 165 bp overlap
ESR1 7 datasets
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 190 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 133 bp overlap
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 249 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 199 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 235 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 154 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 274 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 218 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 214 bp overlap
FOXA1 25 datasets
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 239 bp overlap
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 233 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 274 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 181 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 218 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 202 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 147 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 198 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 241 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 137 bp overlap
ChIP 22Rv1_TFS_Crispr-36 GSE123618.FOXA1.22Rv1_TFS_Crispr-36 171 bp overlap
ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 194 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 258 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 250 bp overlap
ChIP LNCaP GSE56288.FOXA1.LNCaP 191 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 164 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 151 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 247 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 257 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 262 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 207 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 216 bp overlap
ChIP breast_tumor_Female_7 GSE104399.FOXA1.breast_tumor_Female_7 206 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 224 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 212 bp overlap
FOXA2 1 dataset
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 255 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 50 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 187 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 180 bp overlap
HOXB13 7 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 245 bp overlap
ChIP 22Rv1 GSE129951.HOXB13.22Rv1 172 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 218 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 192 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 145 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 274 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 126 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 89 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 156 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 184 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 274 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 274 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 274 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 194 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 203 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 101 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 97 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 165 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 274 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 90 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 274 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 274 bp overlap
POLR2A 7 datasets
ChIP PFSK-1 ENCFF576NIT 60 bp overlap
ChIP adrenal gland ENCFF843OBJ 274 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 252 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 274 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 166 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 221 bp overlap
ChIP stomach ENCFF820WZN 195 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 154 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 274 bp overlap
SMARCA4 5 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 129 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 74 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 101 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 274 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 83 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 102 bp overlap
STAT1 1 dataset
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 150 bp overlap
STAT3 13 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 139 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 158 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 114 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 134 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 147 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 102 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 196 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 183 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 234 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 274 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 274 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 250 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 274 bp overlap
TEAD4 1 dataset
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 232 bp overlap
TLE3 1 dataset
ChIP 22Rv1_WT3_Crispr GSE123618.TLE3.22Rv1_WT3_Crispr 216 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 274 bp overlap
ChIP HEK293 ENCFF582MWI 147 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 191 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 274 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 53 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 274 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 260 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 240 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 274 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 189 bp overlap
ZBTB8A 3 datasets
ChIP HEK293 ENCFF303WRD 211 bp overlap
ChIP HEK293 ENCFF303WRD 251 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 96 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 102 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 106 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 274 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 259 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 216 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 186 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 139 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 129 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 213 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 118 bp overlap
ZNF768 1 dataset
ChIP HEK293 GSE76494.ZNF768.HEK293 188 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 109 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 199 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 213 bp overlap