chr4 : 91,958,747 – 91,958,970
223 bp 79 TFs 0 linked genes
This 223 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:91,953,747 – 91,963,970
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
Ahr::Arnt 1 dataset
Motif DE_36h DE_36h-AhrArnt_MA0006.2 5 bp overlap
BARX1 3 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 212 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 223 bp overlap
BRD4 2 datasets
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 207 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 188 bp overlap
BSX 3 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP MCF-7 ENCFF570JPP 223 bp overlap
DLX1 3 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 3 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx3 3 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 3 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 161 bp overlap
EN2 3 datasets
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
FOSL2 1 dataset
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 160 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 143 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 143 bp overlap
GBX1 3 datasets
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GBX2 3 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 179 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 174 bp overlap
HESX1 3 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA7 3 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_36h DE_36h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_36h DE_36h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_36h DE_36h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_36h DE_36h-KLF3_MA1516.2 10 bp overlap
KLF6 1 dataset
Motif DE_36h DE_36h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_36h DE_36h-KLF7_MA1959.2 8 bp overlap
KLF9 2 datasets
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 137 bp overlap
LBX1 3 datasets
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LBX2 3 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 3 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LHX9 3 datasets
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 150 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 3 datasets
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap
MSX1 3 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 3 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 223 bp overlap
Msx3 3 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NFIA 1 dataset
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
Nobox 3 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
PAX3 3 datasets
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
Motif DE_36h DE_36h-PAX3_MA0780.1 10 bp overlap
Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 83 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCFF174WDB 50 bp overlap
PKNOX2 3 datasets
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
Motif DE_36h DE_36h-PKNOX2_MA0783.1 12 bp overlap
Motif ES_0h ES_0h-PKNOX2_MA0783.1 12 bp overlap
PRRX2 3 datasets
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
Pax7 3 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif DE_36h DE_36h-Pax7_MA0680.3 10 bp overlap
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
RAX 3 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RFX1 12 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif DE_36h DE_36h-RFX1_MA0509.3 16 bp overlap
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
ChIP HepG2 ENCFF144SCF 223 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 223 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 223 bp overlap
ChIP K562 ENCFF421AVO 223 bp overlap
ChIP K562 ENCFF809XVG 223 bp overlap
ChIP MCF-7 ENCFF782EZS 223 bp overlap
ChIP MCF-7 ENCFF973QAD 223 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 223 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 223 bp overlap
RFX2 3 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif DE_36h DE_36h-RFX2_MA0600.3 14 bp overlap
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RFX3 3 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif DE_36h DE_36h-RFX3_MA0798.3 16 bp overlap
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RFX5 3 datasets
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif DE_36h DE_36h-RFX5_MA0510.3 14 bp overlap
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 55 bp overlap
SP3 1 dataset
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP8 1 dataset
Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_36h DE_36h-SP9_MA1564.2 10 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 94 bp overlap
TEAD4 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 84 bp overlap
TGIF1 3 datasets
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
Motif DE_36h DE_36h-TGIF1_MA0796.1 12 bp overlap
Motif ES_0h ES_0h-TGIF1_MA0796.1 12 bp overlap
TGIF2 3 datasets
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
Motif DE_36h DE_36h-TGIF2_MA0797.1 12 bp overlap
Motif ES_0h ES_0h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 3 datasets
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
Motif DE_36h DE_36h-TGIF2LX_MA1571.1 12 bp overlap
Motif ES_0h ES_0h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 3 datasets
Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap
Motif DE_36h DE_36h-TGIF2LY_MA1572.1 12 bp overlap
Motif ES_0h ES_0h-TGIF2LY_MA1572.1 12 bp overlap
ZBTB32 1 dataset
Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap
ZNF189 1 dataset
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
ZNF317 1 dataset
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
ZNF341 1 dataset
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
ZNF354A 3 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 101 bp overlap
ZNF675 3 datasets
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Motif DE_36h DE_36h-ZNF675_MA1714.2 19 bp overlap
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF708 1 dataset
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
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