chr4 : 31,974,390 31,974,925
535 bp 105 TFs 0 linked genes
This 535 bp open chromatin element has no linked target genes and is bound by 105 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:31,969,390 – 31,979,925
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
105 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
ARGFX 1 dataset
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
ATOH7 1 dataset
Motif DE_36h DE_36h-ATOH7_MA1468.1 10 bp overlap
Atoh1 1 dataset
Motif DE_36h DE_36h-Atoh1_MA0461.3 8 bp overlap
BHLHE23 1 dataset
Motif DE_36h DE_36h-BHLHE23_MA0817.2 10 bp overlap
CDX1 1 dataset
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
DRGX 1 dataset
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
ESR1 1 dataset
Motif DE_36h DE_36h-ESR1_MA0112.4 15 bp overlap
ESR2 1 dataset
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
ESX1 1 dataset
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 535 bp overlap
ChIP DE DE-FOXA2-2 535 bp overlap
FOXN3 1 dataset
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 535 bp overlap
ChIP DE DE-GATA4-2 535 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 535 bp overlap
ChIP DE DE-GATA6-2 535 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 413 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 269 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 253 bp overlap
GBX1 1 dataset
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
GSX1 1 dataset
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
HOXA1 1 dataset
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXB1 1 dataset
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXB9 1 dataset
Motif DE_36h DE_36h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_36h DE_36h-HOXC10_MA0905.2 9 bp overlap
HOXC11 1 dataset
Motif DE_36h DE_36h-HOXC11_MA0651.3 11 bp overlap
HOXC12 1 dataset
Motif DE_36h DE_36h-HOXC12_MA0906.2 10 bp overlap
HOXC8 1 dataset
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
HOXC9 1 dataset
Motif DE_36h DE_36h-HOXC9_MA0485.3 9 bp overlap
HOXD10 1 dataset
Motif DE_36h DE_36h-HOXD10_MA1506.2 10 bp overlap
HOXD11 1 dataset
Motif DE_36h DE_36h-HOXD11_MA0908.2 9 bp overlap
HOXD3 1 dataset
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
Hoxa11 1 dataset
Motif DE_36h DE_36h-Hoxa11_MA0911.2 9 bp overlap
ISX 1 dataset
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
KLF11 1 dataset
Motif DE_36h DE_36h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
LBX1 1 dataset
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MAF 1 dataset
Motif DE_36h DE_36h-MAF_MA1520.2 13 bp overlap
MEF2B 1 dataset
Motif DE_36h DE_36h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
NKX6-2 1 dataset
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
PDX1 1 dataset
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
POU1F1 1 dataset
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
POU5F1B 2 datasets
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
PRRX1 1 dataset
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAX2 1 dataset
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
RORA 1 dataset
Motif DE_36h DE_36h-RORA_MA0071.1 10 bp overlap
RORB 1 dataset
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap
RREB1 1 dataset
Motif DE_36h DE_36h-RREB1_MA0073.2 19 bp overlap
SHOX 1 dataset
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SP3 1 dataset
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap
Shox2 1 dataset
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
TLX2 1 dataset
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
ZNF214 1 dataset
Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap
ZNF35 1 dataset
Motif DE_36h DE_36h-ZNF35_MA2333.1 7 bp overlap
ZNF416 1 dataset
Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap
ZNF547 1 dataset
Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap
mix-a 1 dataset
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap