chr3 : 182,216,078 182,216,590
512 bp 57 TFs 0 linked genes
This 512 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:182,211,078 – 182,221,590
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
CEBPG 1 dataset
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 212 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 154 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 55 bp overlap
ChIP SK-N-SH ENCFF764OZD 80 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 73 bp overlap
GATA3 2 datasets
ChIP Kelly GSE65664.GATA3.Kelly 86 bp overlap
ChIP SH-SY5Y ENCFF475HYF 121 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 318 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 79 bp overlap
GATA6 5 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 432 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 469 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 287 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 322 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 374 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 60 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 81 bp overlap
JUN 1 dataset
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
KLF16 1 dataset
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
KLF3 1 dataset
Motif DE_36h DE_36h-KLF3_MA1516.2 10 bp overlap
KLF5 2 datasets
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 103 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 211 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 141 bp overlap
MAFK 5 datasets
ChIP A549 ENCFF371EPR 135 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF743ZOF 122 bp overlap
ChIP HepG2 ENCFF767LDG 129 bp overlap
ChIP IMR-90 ENCFF336DHZ 137 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 103 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 224 bp overlap
MZF1 3 datasets
Motif DE_36h DE_36h-MZF1_MA0056.3 8 bp overlap
ChIP HEK293 ENCFF683ZWN 205 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 185 bp overlap
NFYA 1 dataset
Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 124 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 54 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 289 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 183 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 333 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 329 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 350 bp overlap
SP3 1 dataset
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 50 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 148 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 297 bp overlap
ChIP HEK293 ENCFF582MWI 97 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 173 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 111 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 229 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 299 bp overlap
ZNF143 1 dataset
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 330 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 210 bp overlap
ZNF528 1 dataset
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 162 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 140 bp overlap