chr3 : 176,799,725 – 176,799,898
173 bp 59 TFs 0 linked genes
This 173 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:176,794,725 – 176,804,898
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 25 datasets
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 126 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 137 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 127 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 173 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 153 bp overlap
ChIP VCaP GSE148358.AR.VCaP 73 bp overlap
ChIP breast_tumor_Male_20 GSE104399.AR.breast_tumor_Male_20 137 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 85 bp overlap
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 140 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 137 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 67 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 74 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 105 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 58 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 59 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 134 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 173 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 173 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 149 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 173 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 163 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 52 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 173 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 132 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 59 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 119 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 107 bp overlap
BRD4 5 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 173 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 173 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 173 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 130 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 173 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 173 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 150 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 148 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 71 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 173 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 173 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 98 bp overlap
ESR1 14 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 66 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 172 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 119 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 50 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 100 bp overlap
ChIP T-47D_JC4732 GSE126004.ESR1.T-47D_JC4732 157 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 173 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 151 bp overlap
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 127 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 173 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 116 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 82 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 106 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 173 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 173 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 69 bp overlap
FOXA1 44 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 173 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 159 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 103 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 107 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 114 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 118 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 119 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 86 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 51 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 173 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 159 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 110 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 117 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 79 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 86 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 173 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 121 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 148 bp overlap
ChIP T-47D_JC4746 GSE126004.FOXA1.T-47D_JC4746 94 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 162 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 173 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 76 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 129 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 101 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 77 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 173 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 124 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 173 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 115 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 129 bp overlap
ChIP breast_tumor_Female_6 GSE104399.FOXA1.breast_tumor_Female_6 89 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 173 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 73 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 107 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 90 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 149 bp overlap
ChIP prostate_2078 GSE130408.FOXA1.prostate_2078 56 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 63 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 153 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 173 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 66 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 132 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 173 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 84 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 173 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 69 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 58 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 93 bp overlap
GRHL1 1 dataset
ChIP MCF-7 GSE140185.GRHL1.MCF-7 110 bp overlap
GRHL2 10 datasets
ChIP HBE GSE46194.GRHL2.HBE 157 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 173 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 145 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 74 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 152 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 173 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 87 bp overlap
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 103 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 143 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 173 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 110 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 91 bp overlap
HOXB13 15 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 65 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 173 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 94 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 80 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 50 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 102 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 71 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 98 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 167 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 173 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 173 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 168 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 173 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 135 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 73 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 136 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 62 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_HOTTIP-KO GSE114981.KMT2A.MOLM-13_HOTTIP-KO 173 bp overlap
MED1 1 dataset
ChIP LNCaP_Veh GSE125245.MED1.LNCaP_Veh 66 bp overlap
MYC 2 datasets
ChIP LNCaP GSE117430.MYC.LNCaP 135 bp overlap
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 131 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 135 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 173 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 171 bp overlap
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 75 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 99 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR3C1 3 datasets
ChIP HCC1937 GSE152203.NR3C1.HCC1937 55 bp overlap
ChIP HCC70 GSE152203.NR3C1.HCC70 59 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 126 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
ONECUT2 1 dataset
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 59 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 153 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 138 bp overlap
ChIP islet ERP001456.PDX1.islet 51 bp overlap
PGR 3 datasets
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 154 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 173 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 173 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 55 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 126 bp overlap
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 173 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 106 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 2 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 173 bp overlap
POU5F1B 1 dataset
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
PRKDC 1 dataset
ChIP MCF-7_E2 GSE60270.PRKDC.MCF-7_E2 73 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 173 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 172 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 99 bp overlap
SMARCA4 1 dataset
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 173 bp overlap
SMARCB1 5 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 120 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 173 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 82 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 118 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 173 bp overlap
STAT3 22 datasets
ChIP A-137 GSE85579.STAT3.A-137 81 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 173 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 173 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 173 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 138 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 173 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 173 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 140 bp overlap
ChIP MCF-7_jc5846 GSE126004.STAT3.MCF-7_jc5846 62 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 165 bp overlap
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 173 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 173 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 135 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 105 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 154 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 173 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 173 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 165 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 173 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 173 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 173 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 173 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 173 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 101 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 173 bp overlap
YY1AP1 2 datasets
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 171 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 134 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 137 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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