chr3 : 130,832,166 130,832,580
414 bp 72 TFs 0 linked genes
This 414 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:130,827,166 – 130,837,580
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 168 bp overlap
BRD4 2 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 55 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 65 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 217 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 87 bp overlap
FOXA1 20 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 100 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 199 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF740VZW 241 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 187 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 203 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 132 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 107 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 90 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 130 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 110 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 118 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 193 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 204 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 139 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 148 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 153 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 146 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 90 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 62 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 349 bp overlap
ChIP DE DE-FOXA2-2 354 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 3 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
ChIP K562 ENCFF348SOM 370 bp overlap
ChIP K562 ENCFF781VSC 282 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 2 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
ChIP WTC11 ENCFF875IGU 322 bp overlap
FOXK2 3 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
ChIP K562 ENCFF245WKP 193 bp overlap
ChIP K562 ENCFF851PFH 200 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 184 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 299 bp overlap
ChIP HEK293 ENCFF446EIF 98 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF485ALN 265 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 52 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 107 bp overlap
ChIP K562 ENCFF320EQC 300 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 307 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 61 bp overlap
ChIP K562 ENCFF320GSD 145 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 106 bp overlap
ChIP K562 ENCFF286KMN 234 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 155 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 165 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 74 bp overlap
ChIP K562 ENCFF236IUS 117 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 105 bp overlap
SMARCA4 1 dataset
ChIP K562 ENCFF506JCB 285 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP2 1 dataset
ChIP HEK293 ENCFF181QXT 312 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 60 bp overlap
STAT3 1 dataset
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 73 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 116 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 291 bp overlap
YY1 5 datasets
ChIP HEK293 ENCFF734SBY 227 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 180 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 129 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 86 bp overlap
ChIP K562 ENCFF660QRE 297 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 221 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 137 bp overlap
ChIP K562 ENCFF352SDL 370 bp overlap
ZNF281 2 datasets
ChIP K562 ENCFF594VNM 311 bp overlap
ChIP WTC11 ENCFF551GAV 286 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 414 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCFF468FCG 304 bp overlap
ZSCAN29 1 dataset
Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap