chr1 : 61,951,726 61,951,903
177 bp 65 TFs 0 linked genes
This 177 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:61,946,726 – 61,956,903
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 148 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 124 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 106 bp overlap
ATF4 1 dataset
Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 126 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 141 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 177 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 129 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 101 bp overlap
CEBPG 1 dataset
Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 177 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 138 bp overlap
Dux 1 dataset
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 177 bp overlap
FOS 1 dataset
Motif ES_0h ES_0h-FOS_MA0476.2 8 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 177 bp overlap
FOXA1 1 dataset
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
FOXA2 1 dataset
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
FOXG1 1 dataset
Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 177 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 176 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 177 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 177 bp overlap
FOXO4 1 dataset
Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap
FOXP3 1 dataset
Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap
FOXS1 1 dataset
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap
Foxo1 1 dataset
Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 166 bp overlap
GTF2F1 1 dataset
ChIP H1 ENCFF399TGL 177 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 123 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 170 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 177 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 146 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 93 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 177 bp overlap
Jun 1 dataset
Motif ES_0h ES_0h-Jun_MA0489.3 8 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 177 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 177 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 111 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 152 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 116 bp overlap
ChIP H1 ENCFF747ZPQ 177 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 177 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 177 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 104 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 177 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 177 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 177 bp overlap
ChIP hESC GSE18292.NANOG.hESC 162 bp overlap
ChIP hESC GSE20650.NANOG.hESC 161 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 112 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 59 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 163 bp overlap
POU5F1 12 datasets
ChIP GM23338 ENCFF333SNB 177 bp overlap
ChIP H1 ENCFF698ZAP 177 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 177 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 177 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 177 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 116 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 126 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 144 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 177 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 177 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 130 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 84 bp overlap
Prdm5 1 dataset
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 68 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 102 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 121 bp overlap
REST 1 dataset
ChIP neural cell ENCFF882LXX 72 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 100 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 118 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 146 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 174 bp overlap
SMARCA4 9 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 177 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 177 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 177 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 177 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 177 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 177 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 177 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 177 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 177 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 177 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 177 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 154 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 177 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 177 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 162 bp overlap
ChIP hESC GSE18292.SOX2.hESC 163 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 162 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 71 bp overlap
SP4 1 dataset
ChIP H1 ENCFF473YOB 177 bp overlap
STAT3 2 datasets
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 57 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 171 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 177 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 177 bp overlap
ChIP neural cell ENCFF468SPD 142 bp overlap
TBP 1 dataset
ChIP H1 ENCFF859IIO 177 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 73 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 87 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 120 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 177 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 159 bp overlap