chr3 : 101,383,167 – 101,383,971

804 bp 74 TFs 0 linked genes

This 804 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

AR 1 dataset

ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 324 bp overlap

ASCL1 1 dataset

ChIP G523NS_Dox GSE87618.ASCL1.G523NS_Dox 223 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 251 bp overlap

BRD1 1 dataset

ChIP HUES-64 GSE104059.BRD1.HUES-64 230 bp overlap

BRD4 2 datasets

ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 236 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 186 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 221 bp overlap

ChIP K562 ENCFF673OEZ 351 bp overlap

CDKN1B 1 dataset

ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 253 bp overlap

CHD1 1 dataset

ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 239 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 357 bp overlap

CLOCK 1 dataset

ChIP BA40_4 GSE96659.CLOCK.BA40_4 150 bp overlap

CTCF 3 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 269 bp overlap

ChIP RH4 GSE83726.CTCF.RH4 165 bp overlap

ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 543 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 175 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 477 bp overlap

ChIP BLaER1 ENCFF460KDD 251 bp overlap

E2F6 1 dataset

Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap

ERF::FOXO1 1 dataset

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

ESR1 6 datasets

ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 401 bp overlap

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 214 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 422 bp overlap

ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 602 bp overlap

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 360 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 223 bp overlap

FOXA1 2 datasets

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 804 bp overlap

ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 455 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 185 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 178 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 232 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 325 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 497 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 231 bp overlap

HNF4A 1 dataset

Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap

HNF4G 1 dataset

Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 293 bp overlap

KLF10 1 dataset

Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap

KLF14 1 dataset

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

KLF15 1 dataset

Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap

MAF1 1 dataset

ChIP THP-1_monocytes GSE96800.MAF1.THP-1_monocytes 153 bp overlap

MAZ 1 dataset

Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap

MED12 2 datasets

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 129 bp overlap

ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 76 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 331 bp overlap

MYCN 1 dataset

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 239 bp overlap

MYOD1 5 datasets

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 506 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 277 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 341 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 171 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 210 bp overlap

MYOG 2 datasets

ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 354 bp overlap

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 258 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 204 bp overlap

NEUROG2 6 datasets

ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 318 bp overlap

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 290 bp overlap

ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 354 bp overlap

ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 283 bp overlap

ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 330 bp overlap

ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 309 bp overlap

NFATC3 1 dataset

ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 246 bp overlap

OLIG2 1 dataset

ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 467 bp overlap

PATZ1 1 dataset

Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap

PGR 1 dataset

ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 422 bp overlap

POLR2A 2 datasets

ChIP spleen ENCFF446ZGT 278 bp overlap

ChIP spleen ENCFF706IUS 175 bp overlap

POLR2G 1 dataset

ChIP K562 ENCFF047BLG 624 bp overlap

RAD21 2 datasets

ChIP H1 ENCFF698EWO 241 bp overlap

ChIP RH4 GSE83726.RAD21.RH4 308 bp overlap

RBBP4 1 dataset

ChIP RH5 GSE155861.RBBP4.RH5 227 bp overlap

RBM22 4 datasets

ChIP K-562 ENCSR848AOP.RBM22.K-562 491 bp overlap

ChIP K-562 GSE120104.RBM22.K-562 525 bp overlap

ChIP K562 ENCFF420JDS 528 bp overlap

ChIP K562 ENCFF629OUL 522 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

RNF2 1 dataset

ChIP WA01 ENCSR784VUY.RNF2.WA01 286 bp overlap

RUNX1 1 dataset

ChIP Jurkat GSE85524.RUNX1.Jurkat 223 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap

SMAD1 1 dataset

ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 187 bp overlap

SMARCA4 1 dataset

ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 221 bp overlap

SP1 1 dataset

Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

SUZ12 1 dataset

ChIP WA01 ENCSR000ATS.SUZ12.WA01 142 bp overlap

TEAD4 3 datasets

ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 214 bp overlap

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

TRIM25 1 dataset

ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 357 bp overlap

TWIST1 2 datasets

ChIP BE2C GSE80151.TWIST1.BE2C 192 bp overlap

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 208 bp overlap

Tfcp2l1 1 dataset

Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap

Thap11 1 dataset

Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap

USF1 1 dataset

ChIP H1 ENCFF090WVU 207 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 223 bp overlap

ZBED4 1 dataset

Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap

ZBTB42 1 dataset

ChIP HEK293 GSE76494.ZBTB42.HEK293 271 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 698 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 246 bp overlap

ZNF547 1 dataset

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

ZNF610 1 dataset

Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap

ZNF680 1 dataset

ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 107 bp overlap

ZNF816 1 dataset

Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap