chr3 : 73,175,761 – 73,176,237

476 bp 66 TFs 1 linked gene

This 476 bp open chromatin element is linked to GPATCH11P1 and is bound by 66 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
GPATCH11P1		7.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

ATF4 3 datasets

Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap

Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap

Motif DE_72h DE_72h-ATF4_MA0833.3 10 bp overlap

BCL6 2 datasets

Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap

Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap

BRD4 2 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 333 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 436 bp overlap

CEBPD 2 datasets

Motif DE_48h DE_48h-CEBPD_MA0836.3 8 bp overlap

Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap

CEBPG 3 datasets

Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

Motif DE_72h DE_72h-CEBPG_MA1636.2 10 bp overlap

ERF::NHLH1 1 dataset

Motif DE_48h DE_48h-ERFNHLH1_MA1938.2 16 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 184 bp overlap

FIGLA 1 dataset

Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 228 bp overlap

FOXD2 2 datasets

Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap

Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap

GATA1::TAL1 2 datasets

Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 1 dataset

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 131 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-2 472 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 225 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 374 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 308 bp overlap

ChIP DE DE-GATA6-2 365 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 211 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 392 bp overlap

HLF 2 datasets

Motif DE_48h DE_48h-HLF_MA0043.4 9 bp overlap

Motif DE_60h DE_60h-HLF_MA0043.4 9 bp overlap

MAZ 2 datasets

Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap

Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap

MEIS1 2 datasets

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 286 bp overlap

NFATC3 2 datasets

Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NFIB 2 datasets

Motif DE_48h DE_48h-NFIB_MA1643.2 17 bp overlap

Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap

NFIC 2 datasets

Motif DE_48h DE_48h-NFIC_MA1527.2 15 bp overlap

Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap

NFIC::TLX1 2 datasets

Motif DE_48h DE_48h-NFICTLX1_MA0119.1 14 bp overlap

Motif DE_60h DE_60h-NFICTLX1_MA0119.1 14 bp overlap

NFIL3 2 datasets

Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap

Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap

NFIX 2 datasets

Motif DE_48h DE_48h-NFIX_MA1528.2 14 bp overlap

Motif DE_60h DE_60h-NFIX_MA1528.2 14 bp overlap

NKX2-2 1 dataset

Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap

Nfatc1 2 datasets

Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

PATZ1 2 datasets

Motif DE_48h DE_48h-PATZ1_MA1961.2 11 bp overlap

Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap

PHOX2B 2 datasets

Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

POU1F1 2 datasets

Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap

Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap

Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap

POU2F2 2 datasets

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap

Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap

POU3F1 2 datasets

Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap

Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap

Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap

POU3F3 2 datasets

Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap

Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

POU5F1 3 datasets

Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap

Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 339 bp overlap

POU5F1B 2 datasets

Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap

Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap

PRDM1 2 datasets

Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap

Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap

Prdm5 3 datasets

Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap

Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap

Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap

REST 2 datasets

Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap

Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap

SCRT1 1 dataset

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 336 bp overlap

SCRT2 1 dataset

ChIP HEK293 ENCFF711QQB 376 bp overlap

SIX2 1 dataset

Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 280 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 218 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 285 bp overlap

SREBF1 1 dataset

Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap

TBX1 1 dataset

Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap

TBX18 2 datasets

Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap

Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap

TBX2 2 datasets

Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap

Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap

TBX3 2 datasets

Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap

Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap

TFAP2C 2 datasets

Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap

Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap

ZEB1 1 dataset

Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap

ZNF148 2 datasets

Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap

Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap

ZNF440 1 dataset

ChIP HEK293T GSE78099.ZNF440.HEK293T 206 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 404 bp overlap

ZNF528 2 datasets

Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

ZNF768 1 dataset

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

ZSCAN16 2 datasets

Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap

Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap

ZSCAN4 2 datasets

Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap

Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap

Zfp335 2 datasets

Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap