chr3 : 64,089,277 64,089,690
413 bp 51 TFs 0 linked genes
This 413 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:64,084,277 – 64,094,690
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 107 bp overlap
CEBPB 7 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 273 bp overlap
ChIP A549 ENCFF235AIY 257 bp overlap
ChIP A549 ENCFF781RLJ 227 bp overlap
ChIP A549 ENCFF797MXZ 285 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 210 bp overlap
ChIP IMR-90 ENCFF468UGY 203 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 275 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 235 bp overlap
EHF 1 dataset
ChIP A-549 ENCSR171TDM.EHF.A-549 143 bp overlap
EP300 2 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 254 bp overlap
ChIP A549 ENCFF960ZEI 413 bp overlap
EWSR1 1 dataset
ChIP K-562 ENCSR142YYA.EWSR1.K-562 282 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 120 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 218 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 260 bp overlap
FOXA1 1 dataset
ChIP A-549 ENCSR000BPX.FOXA1.A-549 204 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 384 bp overlap
ChIP DE DE-FOXA2-2 365 bp overlap
GATA3 1 dataset
ChIP A-549 ENCSR000BTI.GATA3.A-549 158 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 354 bp overlap
ChIP DE DE-GATA4-2 394 bp overlap
ChIP foregut GSE117136.GATA4.foregut 286 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 338 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 413 bp overlap
ChIP DE DE-GATA6-2 413 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 218 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 227 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 310 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 212 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 246 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
ChIP foregut GSE117136.GATA6.foregut 373 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 162 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 406 bp overlap
JUN 1 dataset
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 297 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 281 bp overlap
MED1 1 dataset
ChIP A-549 GSE76893.MED1.A-549 206 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCFF683ZWN 108 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 184 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 248 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 138 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 193 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 212 bp overlap
NFXL1 1 dataset
ChIP GM12878 ENCSR746XEG.NFXL1.GM12878 227 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 122 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 123 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 263 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 244 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 371 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 183 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 72 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 117 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 82 bp overlap
RAD21 1 dataset
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 282 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR916BOH.RB1.GM12878 115 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 112 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 401 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 249 bp overlap
SMAD3 1 dataset
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 275 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 110 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 267 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 170 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 175 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 325 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 253 bp overlap
ChIP HEK293 ENCFF582MWI 413 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 124 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 280 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 334 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 263 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF694AXU 121 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 187 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 138 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 97 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 143 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 344 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 378 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 294 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 89 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 77 bp overlap