chr3 : 49,908,452 49,908,788
336 bp 53 TFs 2 linked genes
This 336 bp open chromatin element is linked to ENSG00000228008 and MST1R and is bound by 53 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000228008 4.6 kb Proximal Proximity
MST1R 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:49,903,452 – 49,913,788
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
53 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 106 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 74 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 153 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 336 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 242 bp overlap
BRD4 4 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 336 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 186 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 253 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 336 bp overlap
CTCF 1 dataset
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 206 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 194 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 86 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 245 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 127 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 222 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 216 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 201 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 87 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 221 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 197 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 209 bp overlap
ChIP erythroblast ENCFF867JAR 336 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 336 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 224 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 336 bp overlap
ChIP DE DE-GATA4-2 336 bp overlap
ChIP foregut GSE117136.GATA4.foregut 253 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 329 bp overlap
ChIP DE DE-GATA6-2 336 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 336 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 336 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 336 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 336 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 336 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 232 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 169 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 332 bp overlap
ChIP foregut GSE117136.GATA6.foregut 332 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 336 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 301 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 309 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 255 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 302 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 310 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 303 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 311 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 139 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 178 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 227 bp overlap
MAZ 3 datasets
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 152 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 181 bp overlap
ChIP K562 ENCFF333ZIV 302 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 336 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 84 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 274 bp overlap
ChIP hESC GSE18292.NANOG.hESC 95 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 130 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 120 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 305 bp overlap
POLR2A 1 dataset
ChIP erythroblast ENCFF498VMR 336 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 313 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 312 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 336 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 336 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 287 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 336 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 268 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 336 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 307 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 214 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 336 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 134 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TAL1 2 datasets
ChIP CD34 GSE52924.TAL1.CD34 151 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 149 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 187 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 336 bp overlap
XRCC5 3 datasets
ChIP K-562 GSE120104.XRCC5.K-562 130 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 72 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 141 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 175 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 97 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 327 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 336 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 336 bp overlap
ChIP K562 ENCFF352SDL 336 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 336 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 322 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 233 bp overlap